Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN9O95484 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.77□□□□□ -1.65
CLDN9O95484 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN9O95484 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.77□□□□□ -1.65
CLDN9O95484 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.77□□□□□ -1.65
CLDN9O95484 DDX18P5-201ENST00000534547 1306 ntBASIC4.77□□□□□ -1.65
CLDN9O95484 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CLDN9O95484 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.77□□□□□ -1.65
CLDN9O95484 TCP1P3-201ENST00000414406 1498 ntBASIC4.77□□□□□ -1.65
CLDN9O95484 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.77□□□□□ -1.65
CLDN9O95484 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.77□□□□□ -1.65
CLDN9O95484 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CLDN9O95484 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.77□□□□□ -1.65
CLDN9O95484 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN9O95484 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN9O95484 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CLDN9O95484 RNU6-729P-201ENST00000384399 107 ntBASIC4.77□□□□□ -1.65
CLDN9O95484 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN9O95484 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.77□□□□□ -1.65
CLDN9O95484 DPPA2P3-201ENST00000411853 655 ntBASIC4.77□□□□□ -1.65
CLDN9O95484 BMS1P13-201ENST00000417301 885 ntBASIC4.77□□□□□ -1.65
CLDN9O95484 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN9O95484 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN9O95484 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN9O95484 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN9O95484 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.77□□□□□ -1.65
CLDN9O95484 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN9O95484 RPL34P20-201ENST00000442771 351 ntBASIC4.77□□□□□ -1.65
CLDN9O95484 MTND4LP12-201ENST00000448237 295 ntBASIC4.77□□□□□ -1.65
CLDN9O95484 AURKAPS1-201ENST00000451805 1212 ntBASIC4.77□□□□□ -1.65
CLDN9O95484 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.77□□□□□ -1.65
CLDN9O95484 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN9O95484 SEPT7P6-201ENST00000469999 1143 ntBASIC4.77□□□□□ -1.65
CLDN9O95484 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN9O95484 AC090686.1-201ENST00000481577 749 ntBASIC4.77□□□□□ -1.65
CLDN9O95484 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN9O95484 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN9O95484 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN9O95484 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN9O95484 AC092490.3-201ENST00000545370 572 ntBASIC4.77□□□□□ -1.65
CLDN9O95484 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.77□□□□□ -1.65
CLDN9O95484 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN9O95484 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN9O95484 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN9O95484 DPRXP4-201ENST00000578053 568 ntBASIC4.77□□□□□ -1.65
CLDN9O95484 SNORD39.2-201ENST00000579995 76 ntBASIC4.77□□□□□ -1.65
CLDN9O95484 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN9O95484 RN7SL435P-201ENST00000584418 282 ntBASIC4.77□□□□□ -1.65
CLDN9O95484 TAS2R6P-201ENST00000605022 826 ntBASIC4.77□□□□□ -1.65
CLDN9O95484 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN9O95484 AC243960.7-201ENST00000623532 707 ntBASIC4.77□□□□□ -1.65
CLDN9O95484 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN9O95484 AC009643.2-201ENST00000603543 1448 ntBASIC4.77□□□□□ -1.65
CLDN9O95484 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN9O95484 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.77□□□□□ -1.65
CLDN9O95484 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN9O95484 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN9O95484 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.76□□□□□ -1.65
CLDN9O95484 AL731566.1-201ENST00000620490 1937 ntBASIC4.76□□□□□ -1.65
CLDN9O95484 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN9O95484 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.76□□□□□ -1.65
CLDN9O95484 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.76□□□□□ -1.65
CLDN9O95484 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CLDN9O95484 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.76□□□□□ -1.65
CLDN9O95484 RN7SKP74-201ENST00000362849 309 ntBASIC4.76□□□□□ -1.65
CLDN9O95484 RNA5SP455-201ENST00000365190 119 ntBASIC4.76□□□□□ -1.65
CLDN9O95484 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CLDN9O95484 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CLDN9O95484 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN9O95484 AL078599.1-201ENST00000402075 293 ntBASIC4.76□□□□□ -1.65
CLDN9O95484 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.76□□□□□ -1.65
CLDN9O95484 AC005033.1-201ENST00000428904 813 ntBASIC4.76□□□□□ -1.65
CLDN9O95484 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.76□□□□□ -1.65
CLDN9O95484 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.76□□□□□ -1.65
CLDN9O95484 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.76□□□□□ -1.65
CLDN9O95484 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.76□□□□□ -1.65
CLDN9O95484 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.76□□□□□ -1.65
CLDN9O95484 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.76□□□□□ -1.65
CLDN9O95484 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN9O95484 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.76□□□□□ -1.65
CLDN9O95484 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.76□□□□□ -1.65
CLDN9O95484 AC026688.1-201ENST00000520639 1168 ntBASIC4.76□□□□□ -1.65
CLDN9O95484 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.76□□□□□ -1.65
CLDN9O95484 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.76□□□□□ -1.65
CLDN9O95484 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.76□□□□□ -1.65
CLDN9O95484 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN9O95484 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.76□□□□□ -1.65
CLDN9O95484 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.76□□□□□ -1.65
CLDN9O95484 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.76□□□□□ -1.65
CLDN9O95484 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.76□□□□□ -1.65
CLDN9O95484 AL627230.1-201ENST00000613077 211 ntBASIC4.76□□□□□ -1.65
CLDN9O95484 AC073575.2-201ENST00000614212 627 ntBASIC4.76□□□□□ -1.65
CLDN9O95484 AL591926.8-201ENST00000616876 211 ntBASIC4.76□□□□□ -1.65
CLDN9O95484 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.76□□□□□ -1.65
CLDN9O95484 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CLDN9O95484 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN9O95484 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN9O95484 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN9O95484 PCAT14-202ENST00000627127 3935 ntBASIC4.76□□□□□ -1.65
CLDN9O95484 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms