Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 MTCO2P22-201ENST00000603246 681 ntBASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 AC023813.4-201ENST00000607580 580 ntBASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 AC005899.6-201ENST00000620729 297 ntBASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 MAPK10-303ENST00000641324 3959 ntBASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 RNA5SP90-201ENST00000364801 99 ntBASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 MIR7-1-201ENST00000384871 110 ntBASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 TMBIM7P-201ENST00000418074 855 ntBASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 OR2X1P-201ENST00000421144 687 ntBASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 AC006065.1-201ENST00000422539 802 ntBASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 RPS26P4-201ENST00000431743 355 ntBASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 NMNAT1P2-201ENST00000435192 860 ntBASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 CYCSP11-201ENST00000436426 315 ntBASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 AC019185.1-201ENST00000442718 389 ntBASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 RPL5P30-201ENST00000465511 891 ntBASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 AC104629.2-201ENST00000468627 598 ntBASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 AC020890.1-201ENST00000491837 504 ntBASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 ENPP7P9-201ENST00000514456 627 ntBASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 MRPS5P3-201ENST00000515577 166 ntBASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 AC067904.2-201ENST00000517322 1283 ntBASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 AL049830.4-201ENST00000555149 351 ntBASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 AC092868.3-201ENST00000560515 784 ntBASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 AC022387.2-201ENST00000604050 448 ntBASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 AC135068.12-201ENST00000637370 931 ntBASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KCNIP3Q9Y2W7 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 AL359922.3-201ENST00000624779 1670 ntBASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 IL6STP1-201ENST00000346911 1020 ntBASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 RN7SKP113-201ENST00000363891 295 ntBASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 RNA5SP232-201ENST00000364144 119 ntBASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 AC004386.1-201ENST00000393214 761 ntBASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 AP000580.1-201ENST00000404439 358 ntBASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 AL133388.1-201ENST00000404509 287 ntBASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 HMGN1P20-201ENST00000411849 300 ntBASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 NFU1P1-201ENST00000413128 774 ntBASIC4.23□□□□□ -1.73
KCNIP3Q9Y2W7 SLC20A1P1-201ENST00000413906 956 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms