Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 USP2-AS1-205ENST00000578923 895 ntTSL 2 BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 ZNF611-214ENST00000600943 560 ntTSL 4 BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 AC121334.2-201ENST00000605387 271 ntBASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 AL021879.1-201ENST00000611756 288 ntBASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 AL109933.4-201ENST00000612111 157 ntBASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 AC026468.1-201ENST00000614981 107 ntBASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 GSTTP1-204ENST00000621179 920 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 PGAM1P5-203ENST00000626376 313 ntTSL 5 BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 AL356599.1-202ENST00000626919 218 ntTSL 5 BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 AC073488.5-201ENST00000631993 754 ntBASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 GCSAML-204ENST00000463359 1822 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 AC022784.6-204ENST00000520390 3442 ntTSL 2 BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 SLC2A14-215ENST00000542546 3120 ntTSL 5 BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 OR9Q1-201ENST00000335397 2488 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 STX18-AS1-206ENST00000608184 3047 ntTSL 3 BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 AC011755.1-201ENST00000623763 2049 ntBASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 AL512329.1-201ENST00000404600 1592 ntBASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 SNRPEP3-201ENST00000338402 276 ntBASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 SNORA71D-201ENST00000363484 134 ntBASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 RNU6-823P-201ENST00000391042 103 ntBASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 RN7SKP232-201ENST00000410170 290 ntBASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 RNU2-38P-201ENST00000410856 79 ntBASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 AC092634.6-201ENST00000418558 192 ntBASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 ARL5AP1-201ENST00000418991 388 ntBASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 RBMY2FP-202ENST00000420346 1263 ntBASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 AL022324.2-201ENST00000434827 780 ntBASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 AL023584.1-201ENST00000437067 349 ntTSL 3 BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 MTND4LP30-201ENST00000454092 297 ntBASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 RPL39P38-201ENST00000467018 153 ntBASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 ZBTB20-AS4-201ENST00000472323 675 ntTSL 3 BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 AL031864.2-201ENST00000498507 350 ntBASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 RNU4ATAC7P-201ENST00000516280 125 ntBASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 SNORA70.23-201ENST00000517218 151 ntBASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 AC008562.1-201ENST00000521763 330 ntBASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 AC131281.1-201ENST00000522984 164 ntBASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 AC011840.3-201ENST00000579378 280 ntTSL 3 BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 AC010201.1-201ENST00000605051 540 ntBASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 AC018690.1-201ENST00000608144 626 ntBASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 AL133351.5-201ENST00000612789 106 ntBASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 EIF3FP1-201ENST00000613970 806 ntBASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 AC093495.1-212ENST00000630173 1162 ntTSL 5 BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 AL158175.1-201ENST00000634327 1127 ntTSL 5 BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 AC026634.1-201ENST00000634369 198 ntBASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 FMO5-203ENST00000441068 1696 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 AL355377.1-201ENST00000621125 1653 ntBASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 CNTRL-212ENST00000613863 2418 ntTSL 5 BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 LAX1-202ENST00000367217 1356 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 FPR3-201ENST00000339223 2620 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 PHF2P2-202ENST00000444553 2865 ntBASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
VPS9D1Q9Y2B5 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms