Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 RPL21P67-201ENST00000402896 478 ntBASIC5.38□□□□□ -1.55
SIX4Q9UIU6 AL355143.1-201ENST00000407101 841 ntBASIC5.38□□□□□ -1.55
SIX4Q9UIU6 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SIX4Q9UIU6 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.38□□□□□ -1.55
SIX4Q9UIU6 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.38□□□□□ -1.55
SIX4Q9UIU6 CHEK2P3-201ENST00000416118 248 ntBASIC5.38□□□□□ -1.55
SIX4Q9UIU6 OR2AM1P-201ENST00000422137 422 ntBASIC5.38□□□□□ -1.55
SIX4Q9UIU6 AL354692.1-201ENST00000423044 315 ntBASIC5.38□□□□□ -1.55
SIX4Q9UIU6 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.38□□□□□ -1.55
SIX4Q9UIU6 AL590762.4-201ENST00000425885 253 ntBASIC5.38□□□□□ -1.55
SIX4Q9UIU6 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.38□□□□□ -1.55
SIX4Q9UIU6 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.38□□□□□ -1.55
SIX4Q9UIU6 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.38□□□□□ -1.55
SIX4Q9UIU6 AC073508.1-201ENST00000428866 656 ntBASIC5.38□□□□□ -1.55
SIX4Q9UIU6 PA2G4P6-201ENST00000438325 1197 ntBASIC5.38□□□□□ -1.55
SIX4Q9UIU6 AL137845.2-201ENST00000444292 988 ntBASIC5.38□□□□□ -1.55
SIX4Q9UIU6 AC004980.3-201ENST00000447046 365 ntBASIC5.38□□□□□ -1.55
SIX4Q9UIU6 snoU13.20-201ENST00000459180 104 ntBASIC5.38□□□□□ -1.55
SIX4Q9UIU6 AC108751.3-201ENST00000461814 1020 ntBASIC5.38□□□□□ -1.55
SIX4Q9UIU6 AC140172.1-201ENST00000502928 141 ntBASIC5.38□□□□□ -1.55
SIX4Q9UIU6 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SIX4Q9UIU6 AC117525.1-201ENST00000515228 503 ntBASIC5.38□□□□□ -1.55
SIX4Q9UIU6 RN7SKP157-201ENST00000516174 282 ntBASIC5.38□□□□□ -1.55
SIX4Q9UIU6 RNA5SP392-201ENST00000516905 112 ntBASIC5.38□□□□□ -1.55
SIX4Q9UIU6 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.38□□□□□ -1.55
SIX4Q9UIU6 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC5.38□□□□□ -1.55
SIX4Q9UIU6 GCSHP4-201ENST00000538792 439 ntBASIC5.38□□□□□ -1.55
SIX4Q9UIU6 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.38□□□□□ -1.55
SIX4Q9UIU6 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SIX4Q9UIU6 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.38□□□□□ -1.55
SIX4Q9UIU6 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SIX4Q9UIU6 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.38□□□□□ -1.55
SIX4Q9UIU6 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.38□□□□□ -1.55
SIX4Q9UIU6 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.38□□□□□ -1.55
SIX4Q9UIU6 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.38□□□□□ -1.55
SIX4Q9UIU6 DNAJC19P3-201ENST00000594491 331 ntBASIC5.38□□□□□ -1.55
SIX4Q9UIU6 AC242628.1-201ENST00000606810 391 ntBASIC5.38□□□□□ -1.55
SIX4Q9UIU6 EIF3FP1-201ENST00000613970 806 ntBASIC5.38□□□□□ -1.55
SIX4Q9UIU6 AC022306.3-201ENST00000619930 550 ntBASIC5.38□□□□□ -1.55
SIX4Q9UIU6 AC087385.3-201ENST00000620477 187 ntBASIC5.38□□□□□ -1.55
SIX4Q9UIU6 AC091905.4-201ENST00000623432 202 ntBASIC5.38□□□□□ -1.55
SIX4Q9UIU6 FRG1EP-201ENST00000634469 770 ntBASIC5.38□□□□□ -1.55
SIX4Q9UIU6 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
SIX4Q9UIU6 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SIX4Q9UIU6 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
SIX4Q9UIU6 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SIX4Q9UIU6 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SIX4Q9UIU6 ADAM5-202ENST00000399789 1942 ntBASIC5.38□□□□□ -1.55
SIX4Q9UIU6 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SIX4Q9UIU6 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.38□□□□□ -1.55
SIX4Q9UIU6 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SIX4Q9UIU6 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.37□□□□□ -1.55
SIX4Q9UIU6 AC112255.1-201ENST00000624070 2493 ntBASIC5.37□□□□□ -1.55
SIX4Q9UIU6 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SIX4Q9UIU6 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.37□□□□□ -1.55
SIX4Q9UIU6 NLRP3P1-201ENST00000622303 1785 ntBASIC5.37□□□□□ -1.55
SIX4Q9UIU6 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.37□□□□□ -1.55
SIX4Q9UIU6 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SIX4Q9UIU6 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
SIX4Q9UIU6 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.37□□□□□ -1.55
SIX4Q9UIU6 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SIX4Q9UIU6 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SIX4Q9UIU6 AC013442.1-201ENST00000397347 228 ntBASIC5.37□□□□□ -1.55
SIX4Q9UIU6 RN7SKP125-201ENST00000410481 302 ntBASIC5.37□□□□□ -1.55
SIX4Q9UIU6 CBX1P3-201ENST00000413296 527 ntBASIC5.37□□□□□ -1.55
SIX4Q9UIU6 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.37□□□□□ -1.55
SIX4Q9UIU6 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.37□□□□□ -1.55
SIX4Q9UIU6 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.37□□□□□ -1.55
SIX4Q9UIU6 VN1R54P-201ENST00000435210 1049 ntBASIC5.37□□□□□ -1.55
SIX4Q9UIU6 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.37□□□□□ -1.55
SIX4Q9UIU6 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC5.37□□□□□ -1.55
SIX4Q9UIU6 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
SIX4Q9UIU6 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.37□□□□□ -1.55
SIX4Q9UIU6 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.37□□□□□ -1.55
SIX4Q9UIU6 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SIX4Q9UIU6 BTF3P13-201ENST00000513224 490 ntBASIC5.37□□□□□ -1.55
SIX4Q9UIU6 KCTD9P6-201ENST00000522306 950 ntBASIC5.37□□□□□ -1.55
SIX4Q9UIU6 MTND1P6-201ENST00000523621 946 ntBASIC5.37□□□□□ -1.55
SIX4Q9UIU6 OR7E10P-201ENST00000526420 991 ntBASIC5.37□□□□□ -1.55
SIX4Q9UIU6 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.37□□□□□ -1.55
SIX4Q9UIU6 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
SIX4Q9UIU6 MTND5P21-201ENST00000531961 522 ntBASIC5.37□□□□□ -1.55
SIX4Q9UIU6 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.37□□□□□ -1.55
SIX4Q9UIU6 AC125612.1-201ENST00000547580 377 ntBASIC5.37□□□□□ -1.55
SIX4Q9UIU6 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.37□□□□□ -1.55
SIX4Q9UIU6 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.37□□□□□ -1.55
SIX4Q9UIU6 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.37□□□□□ -1.55
SIX4Q9UIU6 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.37□□□□□ -1.55
SIX4Q9UIU6 AC011840.5-201ENST00000582125 771 ntBASIC5.37□□□□□ -1.55
SIX4Q9UIU6 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.37□□□□□ -1.55
SIX4Q9UIU6 AC005776.1-201ENST00000603164 290 ntBASIC5.37□□□□□ -1.55
SIX4Q9UIU6 AC024940.4-201ENST00000605507 246 ntBASIC5.37□□□□□ -1.55
SIX4Q9UIU6 RNU6-84P-201ENST00000607737 102 ntBASIC5.37□□□□□ -1.55
SIX4Q9UIU6 AC084036.1-201ENST00000609190 508 ntBASIC5.37□□□□□ -1.55
SIX4Q9UIU6 AP006248.3-201ENST00000623580 594 ntBASIC5.37□□□□□ -1.55
SIX4Q9UIU6 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.37□□□□□ -1.55
SIX4Q9UIU6 AC073869.7-201ENST00000640874 297 ntBASIC5.37□□□□□ -1.55
SIX4Q9UIU6 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
SIX4Q9UIU6 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.37□□□□□ -1.55
SIX4Q9UIU6 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms