Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 CYCSP22-201ENST00000517555 339 ntBASIC4.82□□□□□ -1.64
NDE1Q9NXR1 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 RPL21P7-201ENST00000557463 483 ntBASIC4.82□□□□□ -1.64
NDE1Q9NXR1 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 AC010547.7-201ENST00000570323 333 ntBASIC4.82□□□□□ -1.64
NDE1Q9NXR1 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 FAM60CP-201ENST00000591086 664 ntBASIC4.82□□□□□ -1.64
NDE1Q9NXR1 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 AC096553.1-201ENST00000605169 829 ntBASIC4.82□□□□□ -1.64
NDE1Q9NXR1 AC026979.4-201ENST00000606555 645 ntBASIC4.82□□□□□ -1.64
NDE1Q9NXR1 AL359091.2-201ENST00000609303 556 ntBASIC4.82□□□□□ -1.64
NDE1Q9NXR1 AL356752.1-201ENST00000615844 593 ntBASIC4.82□□□□□ -1.64
NDE1Q9NXR1 WBP1LP8-201ENST00000617401 327 ntBASIC4.82□□□□□ -1.64
NDE1Q9NXR1 AC020978.9-201ENST00000624380 1141 ntBASIC4.82□□□□□ -1.64
NDE1Q9NXR1 MIR193BHG-214ENST00000641765 509 ntBASIC4.82□□□□□ -1.64
NDE1Q9NXR1 KARSP1-201ENST00000451871 1752 ntBASIC4.82□□□□□ -1.64
NDE1Q9NXR1 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 AC005332.5-201ENST00000591222 2919 ntBASIC4.82□□□□□ -1.64
NDE1Q9NXR1 AC104118.1-201ENST00000607625 1589 ntBASIC4.82□□□□□ -1.64
NDE1Q9NXR1 AC091305.2-201ENST00000624049 1576 ntBASIC4.82□□□□□ -1.64
NDE1Q9NXR1 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.82□□□□□ -1.64
NDE1Q9NXR1 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NDE1Q9NXR1 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NDE1Q9NXR1 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.81□□□□□ -1.64
NDE1Q9NXR1 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.81□□□□□ -1.64
NDE1Q9NXR1 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
NDE1Q9NXR1 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
NDE1Q9NXR1 U3.3-201ENST00000362986 216 ntBASIC4.81□□□□□ -1.64
NDE1Q9NXR1 RNU6-618P-201ENST00000363518 112 ntBASIC4.81□□□□□ -1.64
NDE1Q9NXR1 RNU6-670P-201ENST00000364312 104 ntBASIC4.81□□□□□ -1.64
NDE1Q9NXR1 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
NDE1Q9NXR1 MIR7-1-201ENST00000384871 110 ntBASIC4.81□□□□□ -1.64
NDE1Q9NXR1 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
NDE1Q9NXR1 LRRC37BP1-201ENST00000398851 714 ntBASIC4.81□□□□□ -1.64
NDE1Q9NXR1 OR1F12-201ENST00000402365 945 ntBASIC4.81□□□□□ -1.64
NDE1Q9NXR1 RNU2-72P-201ENST00000411175 163 ntBASIC4.81□□□□□ -1.64
NDE1Q9NXR1 VDAC1P9-201ENST00000412766 841 ntBASIC4.81□□□□□ -1.64
NDE1Q9NXR1 EEF1B2P8-201ENST00000414101 671 ntBASIC4.81□□□□□ -1.64
NDE1Q9NXR1 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.81□□□□□ -1.64
NDE1Q9NXR1 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.81□□□□□ -1.64
NDE1Q9NXR1 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.81□□□□□ -1.64
NDE1Q9NXR1 EIF2S2P3-201ENST00000428356 999 ntBASIC4.81□□□□□ -1.64
NDE1Q9NXR1 ZFAND6P1-201ENST00000434138 605 ntBASIC4.81□□□□□ -1.64
NDE1Q9NXR1 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.81□□□□□ -1.64
NDE1Q9NXR1 ZNF736P1Y-201ENST00000440402 1276 ntBASIC4.81□□□□□ -1.64
NDE1Q9NXR1 AL606490.8-201ENST00000441624 319 ntBASIC4.81□□□□□ -1.64
NDE1Q9NXR1 EEF1B2P3-201ENST00000447718 678 ntBASIC4.81□□□□□ -1.64
NDE1Q9NXR1 RPL31P53-201ENST00000457065 348 ntBASIC4.81□□□□□ -1.64
NDE1Q9NXR1 AC011476.1-201ENST00000466725 307 ntBASIC4.81□□□□□ -1.64
NDE1Q9NXR1 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.81□□□□□ -1.64
NDE1Q9NXR1 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.81□□□□□ -1.64
NDE1Q9NXR1 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.81□□□□□ -1.64
NDE1Q9NXR1 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.81□□□□□ -1.64
NDE1Q9NXR1 IGKV2-4-201ENST00000523070 340 ntBASIC4.81□□□□□ -1.64
NDE1Q9NXR1 AC107918.3-201ENST00000533272 382 ntBASIC4.81□□□□□ -1.64
NDE1Q9NXR1 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NDE1Q9NXR1 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NDE1Q9NXR1 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NDE1Q9NXR1 AC026826.3-201ENST00000561747 158 ntBASIC4.81□□□□□ -1.64
NDE1Q9NXR1 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.81□□□□□ -1.64
NDE1Q9NXR1 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC4.81□□□□□ -1.64
NDE1Q9NXR1 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC4.81□□□□□ -1.64
NDE1Q9NXR1 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
NDE1Q9NXR1 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.81□□□□□ -1.64
NDE1Q9NXR1 AL137072.1-201ENST00000603444 466 ntBASIC4.81□□□□□ -1.64
NDE1Q9NXR1 AC000068.2-201ENST00000608816 460 ntBASIC4.81□□□□□ -1.64
NDE1Q9NXR1 MIR6778-201ENST00000617912 73 ntBASIC4.81□□□□□ -1.64
NDE1Q9NXR1 AL162233.1-201ENST00000620014 944 ntBASIC4.81□□□□□ -1.64
NDE1Q9NXR1 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.81□□□□□ -1.64
NDE1Q9NXR1 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
NDE1Q9NXR1 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.81□□□□□ -1.64
NDE1Q9NXR1 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.81□□□□□ -1.64
NDE1Q9NXR1 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.81□□□□□ -1.64
NDE1Q9NXR1 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NDE1Q9NXR1 AC092111.2-201ENST00000611627 1414 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NDE1Q9NXR1 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
NDE1Q9NXR1 AL929601.4-201ENST00000613011 1341 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.8□□□□□ -1.64
NDE1Q9NXR1 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.8□□□□□ -1.64
NDE1Q9NXR1 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NDE1Q9NXR1 RNA5SP319-201ENST00000362768 119 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 RNU1-83P-201ENST00000363426 164 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 RNA5SP28-201ENST00000363841 119 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 RNA5SP372-201ENST00000390836 115 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 SNORA68.2-201ENST00000391263 128 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 AC004386.1-201ENST00000393214 761 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 NUDT19P3-201ENST00000404698 555 ntBASIC4.8□□□□□ -1.64
NDE1Q9NXR1 HDGFP1-201ENST00000405943 252 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms