Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 GAPDHP42-201ENST00000406848 981 ntBASIC5.14□□□□□ -1.59
TRIM4Q9C037 RNU2-22P-201ENST00000411266 212 ntBASIC5.14□□□□□ -1.59
TRIM4Q9C037 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM4Q9C037 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM4Q9C037 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.14□□□□□ -1.59
TRIM4Q9C037 AC016712.1-201ENST00000431088 378 ntBASIC5.14□□□□□ -1.59
TRIM4Q9C037 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM4Q9C037 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM4Q9C037 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.14□□□□□ -1.59
TRIM4Q9C037 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM4Q9C037 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM4Q9C037 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM4Q9C037 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
TRIM4Q9C037 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM4Q9C037 AL356981.1-201ENST00000454879 684 ntBASIC5.14□□□□□ -1.59
TRIM4Q9C037 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
TRIM4Q9C037 AC112206.1-201ENST00000468416 477 ntBASIC5.14□□□□□ -1.59
TRIM4Q9C037 RPL7AP10-201ENST00000481016 791 ntBASIC5.14□□□□□ -1.59
TRIM4Q9C037 NIFKP7-201ENST00000503365 834 ntBASIC5.14□□□□□ -1.59
TRIM4Q9C037 TCP11X3P-202ENST00000514289 1254 ntBASIC5.14□□□□□ -1.59
TRIM4Q9C037 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM4Q9C037 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM4Q9C037 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM4Q9C037 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
TRIM4Q9C037 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM4Q9C037 RN7SL176P-201ENST00000580352 264 ntBASIC5.14□□□□□ -1.59
TRIM4Q9C037 AC000068.2-201ENST00000608816 460 ntBASIC5.14□□□□□ -1.59
TRIM4Q9C037 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM4Q9C037 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
TRIM4Q9C037 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM4Q9C037 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM4Q9C037 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM4Q9C037 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM4Q9C037 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM4Q9C037 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM4Q9C037 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM4Q9C037 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM4Q9C037 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
TRIM4Q9C037 AL592182.3-201ENST00000642132 3304 ntBASIC5.13□□□□□ -1.59
TRIM4Q9C037 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM4Q9C037 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TRIM4Q9C037 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TRIM4Q9C037 RPL32P3-201ENST00000359025 275 ntBASIC5.13□□□□□ -1.59
TRIM4Q9C037 SNORA62-201ENST00000365493 153 ntBASIC5.13□□□□□ -1.59
TRIM4Q9C037 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM4Q9C037 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM4Q9C037 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM4Q9C037 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
TRIM4Q9C037 SNORD56.6-201ENST00000384569 71 ntBASIC5.13□□□□□ -1.59
TRIM4Q9C037 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM4Q9C037 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM4Q9C037 AC108075.1-201ENST00000424692 529 ntBASIC5.13□□□□□ -1.59
TRIM4Q9C037 FAM96AP1-201ENST00000430879 482 ntBASIC5.13□□□□□ -1.59
TRIM4Q9C037 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM4Q9C037 HMGB3P9-201ENST00000441799 583 ntBASIC5.13□□□□□ -1.59
TRIM4Q9C037 AC016772.1-201ENST00000444170 1261 ntBASIC5.13□□□□□ -1.59
TRIM4Q9C037 IGLV2-34-201ENST00000490007 283 ntBASIC5.13□□□□□ -1.59
TRIM4Q9C037 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM4Q9C037 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM4Q9C037 AC013701.1-201ENST00000522657 465 ntBASIC5.13□□□□□ -1.59
TRIM4Q9C037 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TRIM4Q9C037 DYNLL1P4-201ENST00000549314 266 ntBASIC5.13□□□□□ -1.59
TRIM4Q9C037 AP005403.1-201ENST00000579720 229 ntBASIC5.13□□□□□ -1.59
TRIM4Q9C037 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM4Q9C037 AL118522.2-201ENST00000616045 615 ntBASIC5.13□□□□□ -1.59
TRIM4Q9C037 AC079298.2-201ENST00000623885 459 ntBASIC5.13□□□□□ -1.59
TRIM4Q9C037 AP000648.2-201ENST00000624182 404 ntBASIC5.13□□□□□ -1.59
TRIM4Q9C037 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM4Q9C037 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM4Q9C037 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
TRIM4Q9C037 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
TRIM4Q9C037 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
TRIM4Q9C037 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.13□□□□□ -1.59
TRIM4Q9C037 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM4Q9C037 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM4Q9C037 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM4Q9C037 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM4Q9C037 TLK1P1-201ENST00000456760 2440 ntBASIC5.13□□□□□ -1.59
TRIM4Q9C037 DDX18P4-201ENST00000511690 1966 ntBASIC5.13□□□□□ -1.59
TRIM4Q9C037 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM4Q9C037 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM4Q9C037 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM4Q9C037 RNU1-94P-201ENST00000362627 173 ntBASIC5.12□□□□□ -1.59
TRIM4Q9C037 RNA5SP335-201ENST00000363817 110 ntBASIC5.12□□□□□ -1.59
TRIM4Q9C037 RN7SKP224-201ENST00000364140 325 ntBASIC5.12□□□□□ -1.59
TRIM4Q9C037 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM4Q9C037 SNORA51.8-201ENST00000384234 132 ntBASIC5.12□□□□□ -1.59
TRIM4Q9C037 MIR192-201ENST00000384915 110 ntBASIC5.12□□□□□ -1.59
TRIM4Q9C037 DUTP5-201ENST00000406790 469 ntBASIC5.12□□□□□ -1.59
TRIM4Q9C037 RN7SKP27-201ENST00000410684 333 ntBASIC5.12□□□□□ -1.59
TRIM4Q9C037 RPL17P36-201ENST00000420302 549 ntBASIC5.12□□□□□ -1.59
TRIM4Q9C037 GTF2IP2-201ENST00000424290 697 ntBASIC5.12□□□□□ -1.59
TRIM4Q9C037 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM4Q9C037 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.12□□□□□ -1.59
TRIM4Q9C037 AL389915.2-201ENST00000454576 441 ntBASIC5.12□□□□□ -1.59
TRIM4Q9C037 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM4Q9C037 AP000797.2-201ENST00000475768 606 ntBASIC5.12□□□□□ -1.59
TRIM4Q9C037 RN7SL447P-201ENST00000494711 245 ntBASIC5.12□□□□□ -1.59
TRIM4Q9C037 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM4Q9C037 IMPA1P1-201ENST00000510718 842 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms