Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 ZNF226-202ENST00000337433 2565 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 C3AR1-201ENST00000307637 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 RHPN2-201ENST00000254260 3500 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 FRMPD2-202ENST00000374201 4997 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 AC024132.1-201ENST00000382007 2509 ntTSL 2 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 ZPR1-201ENST00000227322 6566 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 HBG2-203ENST00000380259 1772 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 ANKRD6-213ENST00000520793 2489 ntTSL 2 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 CFAP65-202ENST00000341552 5953 ntAPPRIS P4 TSL 5 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 PCDHGC5-201ENST00000252087 4761 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 TOP3A-201ENST00000321105 4056 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 PLD2-205ENST00000572940 3391 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 MFN2-201ENST00000235329 4539 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 ARL5C-201ENST00000269586 540 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 AC092681.1-201ENST00000297369 291 ntBASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 KRTAP20-1-201ENST00000334664 275 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 FXYD1-201ENST00000351325 592 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 Metazoa_SRP.2-201ENST00000359385 269 ntBASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 RNU6-509P-201ENST00000363519 107 ntBASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 JPT2-202ENST00000382710 962 ntTSL 2 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 Y_RNA.454-201ENST00000384224 113 ntBASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 RNY1P4-201ENST00000384595 115 ntBASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 MT-TI-201ENST00000387365 69 ntBASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 AC234771.1-201ENST00000416873 250 ntTSL 2 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 AL049795.1-202ENST00000421616 786 ntTSL 3 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 AL662874.1-201ENST00000426065 230 ntBASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 AC012074.1-202ENST00000431557 419 ntTSL 3 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 AC093106.1-201ENST00000437271 352 ntBASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 CFL1P2-201ENST00000440986 684 ntBASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 AL355990.1-202ENST00000443008 797 ntTSL 3 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 AL606468.1-201ENST00000444750 510 ntTSL 3 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 AL389915.2-201ENST00000454576 441 ntBASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 NDFIP2-AS1-201ENST00000457171 431 ntTSL 3 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 RN7SL843P-201ENST00000485262 297 ntBASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 TPI1P2-201ENST00000491343 752 ntBASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 AC126182.2-201ENST00000496098 339 ntBASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 AC022296.2-201ENST00000512424 202 ntBASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 AP001972.2-201ENST00000529304 216 ntTSL 5 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 AC010768.1-201ENST00000533814 543 ntTSL 3 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 RASAL1-204ENST00000546530 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 HPR-203ENST00000561690 634 ntTSL 5 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 AC013565.2-201ENST00000564874 310 ntBASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 MT3-206ENST00000570176 579 ntTSL 2 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 AC009171.2-201ENST00000573220 318 ntTSL 3 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 AC011471.1-201ENST00000585766 187 ntBASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 AC006547.1-208ENST00000598339 805 ntTSL 5 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 AL359198.2-201ENST00000611836 194 ntBASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 AL158032.2-201ENST00000616818 195 ntBASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 RN7SL1-201ENST00000618786 299 ntBASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 FAS-AS1.2-201ENST00000620386 170 ntBASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 FAM170A-207ENST00000620555 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 SLC12A3-205ENST00000566786 3119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 SLC44A2-202ENST00000407327 3301 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 LGALS8-208ENST00000416919 6097 ntTSL 5 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 ZNF664-201ENST00000337815 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 COL14A1-202ENST00000297848 6466 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 TFDP2-212ENST00000486111 2360 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 FLII-222ENST00000579294 3936 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 C11orf49-202ENST00000378615 1651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 ANKRD46-206ENST00000520552 1686 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 TOR1AIP1-208ENST00000528443 3685 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 RHOT1-210ENST00000581094 3231 ntTSL 2 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 ACOX2-202ENST00000459701 2348 ntTSL 5 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 ILF3-222ENST00000592763 3866 ntTSL 5 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 AC009078.3-201ENST00000624205 4084 ntBASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 CELF2-212ENST00000632728 3827 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 MIR4290HG-201ENST00000426593 2720 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 NDUFAF5-202ENST00000378106 5529 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 AP005131.6-201ENST00000587344 4215 ntBASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 TTLL3-202ENST00000383827 4834 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 AP000894.2-201ENST00000581719 3902 ntBASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 FAM90A8P-201ENST00000528334 1395 ntBASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 ZNF300-201ENST00000274599 3268 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 CUL2-202ENST00000374748 4312 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 CCDC69-201ENST00000355417 3451 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 RIN2-201ENST00000255006 4505 ntAPPRIS P2 TSL 2 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 GGA2-201ENST00000309859 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 CYTH4-201ENST00000248901 3206 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 AC138207.6-201ENST00000579164 1967 ntBASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 KPNA5-201ENST00000356348 2150 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 EIF2A-203ENST00000460851 2198 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 CMKLR1-201ENST00000312143 5283 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 ARNTL-204ENST00000403482 2389 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 SLC24A1-202ENST00000339868 5678 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 CD22-202ENST00000341773 2755 ntTSL 5 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 AP002364.1-201ENST00000623330 3386 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 181.2 ms