Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.53□□□□□ -1.36
RTFDC1Q9BY42 AC122688.1-201ENST00000541494 223 ntBASIC6.53□□□□□ -1.36
RTFDC1Q9BY42 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RTFDC1Q9BY42 AC008033.2-201ENST00000542626 177 ntBASIC6.53□□□□□ -1.36
RTFDC1Q9BY42 AGGF1P9-201ENST00000561884 913 ntBASIC6.53□□□□□ -1.36
RTFDC1Q9BY42 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC6.53□□□□□ -1.36
RTFDC1Q9BY42 AC060780.2-201ENST00000589047 198 ntBASIC6.53□□□□□ -1.36
RTFDC1Q9BY42 AC009597.2-201ENST00000604659 592 ntBASIC6.53□□□□□ -1.36
RTFDC1Q9BY42 AC012557.1-201ENST00000607115 611 ntBASIC6.53□□□□□ -1.36
RTFDC1Q9BY42 AC010435.1-201ENST00000623353 1177 ntBASIC6.53□□□□□ -1.36
RTFDC1Q9BY42 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RTFDC1Q9BY42 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RTFDC1Q9BY42 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.53□□□□□ -1.36
RTFDC1Q9BY42 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RTFDC1Q9BY42 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RTFDC1Q9BY42 MFSD8-216ENST00000641147 4009 ntBASIC6.53□□□□□ -1.36
RTFDC1Q9BY42 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
RTFDC1Q9BY42 AC092451.3-201ENST00000625067 1343 ntBASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 AL158152.1-201ENST00000602652 1435 ntBASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 AC144833.1-201ENST00000567953 4089 ntBASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 AP000568.1-201ENST00000282964 442 ntBASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 U3.3-201ENST00000362986 216 ntBASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 SNORA70.9-201ENST00000384370 135 ntBASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 HMGB3P7-201ENST00000400214 611 ntBASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 SNORD125-201ENST00000459538 96 ntBASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 RPL7P16-201ENST00000479738 738 ntBASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 RN7SL346P-201ENST00000491561 294 ntBASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 GTF2F2P1-201ENST00000511083 675 ntBASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 AC111000.6-201ENST00000514471 709 ntBASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 AL671862.1-201ENST00000515851 349 ntBASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 RNU6-415P-201ENST00000516252 97 ntBASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 SNORA31.13-201ENST00000516624 135 ntBASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 AC010376.1-201ENST00000522101 334 ntBASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 AC079075.1-201ENST00000559543 878 ntBASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 RN7SL356P-201ENST00000582228 248 ntBASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 AC008507.2-201ENST00000588402 1176 ntBASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 AC009237.13-201ENST00000603193 276 ntBASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 AP001153.1-201ENST00000641024 338 ntBASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RTFDC1Q9BY42 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 AC013442.1-201ENST00000397347 228 ntBASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 AL590139.1-201ENST00000416267 400 ntBASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 AC241520.1-201ENST00000422654 1099 ntBASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 EI24P4-201ENST00000423683 1078 ntBASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 OR10T1P-201ENST00000424327 947 ntBASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 RPS4XP16-201ENST00000427198 791 ntBASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 AC092017.2-201ENST00000427600 362 ntBASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 YWHAZP2-201ENST00000440317 728 ntBASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 AC092754.1-201ENST00000472975 479 ntBASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 RPL7P40-201ENST00000481703 745 ntBASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 AC058823.1-201ENST00000485315 474 ntBASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 RN7SL423P-201ENST00000486202 304 ntBASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 CDH12P2-201ENST00000504393 298 ntBASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 AP000916.1-201ENST00000533869 835 ntBASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 BNIP3P1-201ENST00000547295 580 ntBASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 AC010735.1-201ENST00000567305 1026 ntBASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 AC011487.3-201ENST00000593607 453 ntBASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 AC018618.2-201ENST00000604770 446 ntBASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 AC124016.2-201ENST00000610058 665 ntBASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms