Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RPL7P32-201ENST00000457119 744 ntBASIC5.3□□□□□ -1.56
SNX18Q96RF0 AC005410.1-202ENST00000460347 485 ntBASIC5.3□□□□□ -1.56
SNX18Q96RF0 AC010468.1-201ENST00000461022 817 ntBASIC5.3□□□□□ -1.56
SNX18Q96RF0 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.3□□□□□ -1.56
SNX18Q96RF0 AC098847.1-201ENST00000473094 348 ntBASIC5.3□□□□□ -1.56
SNX18Q96RF0 BET1P1-201ENST00000482276 359 ntBASIC5.3□□□□□ -1.56
SNX18Q96RF0 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.3□□□□□ -1.56
SNX18Q96RF0 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.3□□□□□ -1.56
SNX18Q96RF0 RNA5SP303-201ENST00000516192 130 ntBASIC5.3□□□□□ -1.56
SNX18Q96RF0 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.3□□□□□ -1.56
SNX18Q96RF0 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.3□□□□□ -1.56
SNX18Q96RF0 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.3□□□□□ -1.56
SNX18Q96RF0 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.3□□□□□ -1.56
SNX18Q96RF0 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.3□□□□□ -1.56
SNX18Q96RF0 CYCSP38-201ENST00000559840 322 ntBASIC5.3□□□□□ -1.56
SNX18Q96RF0 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
SNX18Q96RF0 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.3□□□□□ -1.56
SNX18Q96RF0 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.3□□□□□ -1.56
SNX18Q96RF0 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SNX18Q96RF0 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.3□□□□□ -1.56
SNX18Q96RF0 AL035411.2-201ENST00000604022 421 ntBASIC5.3□□□□□ -1.56
SNX18Q96RF0 AL451086.1-201ENST00000605596 223 ntBASIC5.3□□□□□ -1.56
SNX18Q96RF0 AL365181.4-201ENST00000609800 547 ntBASIC5.3□□□□□ -1.56
SNX18Q96RF0 uc_338.26-201ENST00000612659 160 ntBASIC5.3□□□□□ -1.56
SNX18Q96RF0 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.3□□□□□ -1.56
SNX18Q96RF0 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SNX18Q96RF0 AC073869.7-201ENST00000640874 297 ntBASIC5.3□□□□□ -1.56
SNX18Q96RF0 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SNX18Q96RF0 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.3□□□□□ -1.56
SNX18Q96RF0 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
SNX18Q96RF0 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.3□□□□□ -1.56
SNX18Q96RF0 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
SNX18Q96RF0 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
SNX18Q96RF0 RBPJP7-201ENST00000442803 1447 ntBASIC5.3□□□□□ -1.56
SNX18Q96RF0 RBPJP5-201ENST00000449433 1447 ntBASIC5.3□□□□□ -1.56
SNX18Q96RF0 AL137141.1-201ENST00000624622 4836 ntBASIC5.3□□□□□ -1.56
SNX18Q96RF0 AC007842.1-201ENST00000597336 2039 ntBASIC5.3□□□□□ -1.56
SNX18Q96RF0 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SNX18Q96RF0 AC017007.4-201ENST00000503353 1352 ntBASIC5.29□□□□□ -1.56
SNX18Q96RF0 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SNX18Q96RF0 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
SNX18Q96RF0 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SNX18Q96RF0 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SNX18Q96RF0 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SNX18Q96RF0 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.29□□□□□ -1.56
SNX18Q96RF0 AC012254.3-201ENST00000591183 2117 ntBASIC5.29□□□□□ -1.56
SNX18Q96RF0 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SNX18Q96RF0 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SNX18Q96RF0 GVINP1-202ENST00000531871 7271 ntBASIC5.29□□□□□ -1.56
SNX18Q96RF0 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SNX18Q96RF0 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.29□□□□□ -1.56
SNX18Q96RF0 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SNX18Q96RF0 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SNX18Q96RF0 RNU1-134P-201ENST00000362935 165 ntBASIC5.29□□□□□ -1.56
SNX18Q96RF0 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SNX18Q96RF0 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.29□□□□□ -1.56
SNX18Q96RF0 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SNX18Q96RF0 AC092642.1-201ENST00000392417 425 ntBASIC5.29□□□□□ -1.56
SNX18Q96RF0 CRIP1P1-201ENST00000427567 185 ntBASIC5.29□□□□□ -1.56
SNX18Q96RF0 VN1R108P-201ENST00000431580 830 ntBASIC5.29□□□□□ -1.56
SNX18Q96RF0 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.29□□□□□ -1.56
SNX18Q96RF0 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.29□□□□□ -1.56
SNX18Q96RF0 AL445928.1-201ENST00000435545 222 ntBASIC5.29□□□□□ -1.56
SNX18Q96RF0 PTGES3P1-201ENST00000439531 483 ntBASIC5.29□□□□□ -1.56
SNX18Q96RF0 AC097499.1-201ENST00000444277 208 ntBASIC5.29□□□□□ -1.56
SNX18Q96RF0 CALM1P2-201ENST00000452941 448 ntBASIC5.29□□□□□ -1.56
SNX18Q96RF0 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.29□□□□□ -1.56
SNX18Q96RF0 RPL38P3-201ENST00000484463 213 ntBASIC5.29□□□□□ -1.56
SNX18Q96RF0 AC091951.3-201ENST00000504093 246 ntBASIC5.29□□□□□ -1.56
SNX18Q96RF0 AC008837.1-201ENST00000511513 412 ntBASIC5.29□□□□□ -1.56
SNX18Q96RF0 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.29□□□□□ -1.56
SNX18Q96RF0 SNORA3.4-201ENST00000515969 96 ntBASIC5.29□□□□□ -1.56
SNX18Q96RF0 IGHV3-63-201ENST00000518422 341 ntBASIC5.29□□□□□ -1.56
SNX18Q96RF0 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.29□□□□□ -1.56
SNX18Q96RF0 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SNX18Q96RF0 AC027369.2-201ENST00000528030 440 ntBASIC5.29□□□□□ -1.56
SNX18Q96RF0 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.29□□□□□ -1.56
SNX18Q96RF0 MTCO2P15-201ENST00000532655 656 ntBASIC5.29□□□□□ -1.56
SNX18Q96RF0 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SNX18Q96RF0 AC126615.2-201ENST00000553003 515 ntBASIC5.29□□□□□ -1.56
SNX18Q96RF0 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SNX18Q96RF0 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.29□□□□□ -1.56
SNX18Q96RF0 MTCYBP28-201ENST00000566728 1132 ntBASIC5.29□□□□□ -1.56
SNX18Q96RF0 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.29□□□□□ -1.56
SNX18Q96RF0 DPRXP4-201ENST00000578053 568 ntBASIC5.29□□□□□ -1.56
SNX18Q96RF0 SNORD39.2-201ENST00000579995 76 ntBASIC5.29□□□□□ -1.56
SNX18Q96RF0 AC069366.1-201ENST00000583159 838 ntBASIC5.29□□□□□ -1.56
SNX18Q96RF0 PIGPP4-201ENST00000584447 307 ntBASIC5.29□□□□□ -1.56
SNX18Q96RF0 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.29□□□□□ -1.56
SNX18Q96RF0 AC110760.3-201ENST00000598794 467 ntBASIC5.29□□□□□ -1.56
SNX18Q96RF0 AC010620.1-201ENST00000601088 1102 ntBASIC5.29□□□□□ -1.56
SNX18Q96RF0 AL133481.2-203ENST00000607558 139 ntBASIC5.29□□□□□ -1.56
SNX18Q96RF0 AC007349.4-201ENST00000608114 532 ntBASIC5.29□□□□□ -1.56
SNX18Q96RF0 AL139407.1-201ENST00000613826 1175 ntBASIC5.29□□□□□ -1.56
SNX18Q96RF0 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.29□□□□□ -1.56
SNX18Q96RF0 AL512652.1-201ENST00000619006 500 ntBASIC5.29□□□□□ -1.56
SNX18Q96RF0 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SNX18Q96RF0 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
SNX18Q96RF0 MIR3974-201ENST00000637126 96 ntBASIC5.29□□□□□ -1.56
SNX18Q96RF0 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms