Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 AL390334.1-201ENST00000556395 450 ntBASIC5.55□□□□□ -1.52
VPS50Q96JG6 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 AC015712.7-201ENST00000615211 635 ntBASIC5.55□□□□□ -1.52
VPS50Q96JG6 AP000676.4-201ENST00000624659 623 ntBASIC5.55□□□□□ -1.52
VPS50Q96JG6 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 CU459211.1-201ENST00000635667 749 ntBASIC5.55□□□□□ -1.52
VPS50Q96JG6 AC083865.1-201ENST00000636634 831 ntBASIC5.55□□□□□ -1.52
VPS50Q96JG6 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS50Q96JG6 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VPS50Q96JG6 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VPS50Q96JG6 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
VPS50Q96JG6 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.54□□□□□ -1.52
VPS50Q96JG6 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VPS50Q96JG6 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VPS50Q96JG6 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VPS50Q96JG6 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VPS50Q96JG6 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 RNU4-74P-201ENST00000411280 161 ntBASIC5.54□□□□□ -1.52
VPS50Q96JG6 RN7SKP279-201ENST00000411383 298 ntBASIC5.54□□□□□ -1.52
VPS50Q96JG6 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 SETP15-201ENST00000412724 337 ntBASIC5.54□□□□□ -1.52
VPS50Q96JG6 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 AC005189.1-201ENST00000431286 310 ntBASIC5.54□□□□□ -1.52
VPS50Q96JG6 CETN4P-201ENST00000432407 469 ntBASIC5.54□□□□□ -1.52
VPS50Q96JG6 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 OR10R1P-201ENST00000441524 1141 ntBASIC5.54□□□□□ -1.52
VPS50Q96JG6 TCEA1P3-201ENST00000443005 880 ntBASIC5.54□□□□□ -1.52
VPS50Q96JG6 RPS7P3-201ENST00000443360 580 ntBASIC5.54□□□□□ -1.52
VPS50Q96JG6 HMGN1P36-201ENST00000446623 298 ntBASIC5.54□□□□□ -1.52
VPS50Q96JG6 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 MTCYBP11-201ENST00000447254 1109 ntBASIC5.54□□□□□ -1.52
VPS50Q96JG6 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 LRRC37A14P-201ENST00000452297 462 ntBASIC5.54□□□□□ -1.52
VPS50Q96JG6 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 AC008280.2-201ENST00000455473 307 ntBASIC5.54□□□□□ -1.52
VPS50Q96JG6 PFN1P6-201ENST00000476786 399 ntBASIC5.54□□□□□ -1.52
VPS50Q96JG6 MTCO3P35-201ENST00000485582 781 ntBASIC5.54□□□□□ -1.52
VPS50Q96JG6 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VPS50Q96JG6 AL136038.1-201ENST00000497246 351 ntBASIC5.54□□□□□ -1.52
VPS50Q96JG6 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 AC109481.1-201ENST00000509173 282 ntBASIC5.54□□□□□ -1.52
VPS50Q96JG6 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 RPS27AP18-201ENST00000515536 459 ntBASIC5.54□□□□□ -1.52
VPS50Q96JG6 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VPS50Q96JG6 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VPS50Q96JG6 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 AL163952.1-202ENST00000569625 600 ntBASIC5.54□□□□□ -1.52
VPS50Q96JG6 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VPS50Q96JG6 AC012557.1-201ENST00000607115 611 ntBASIC5.54□□□□□ -1.52
VPS50Q96JG6 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 AC068057.2-201ENST00000624047 895 ntBASIC5.54□□□□□ -1.52
VPS50Q96JG6 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 SOCS5P3-201ENST00000425115 1576 ntBASIC5.54□□□□□ -1.52
VPS50Q96JG6 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
VPS50Q96JG6 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VPS50Q96JG6 HSPD1P11-201ENST00000508643 1702 ntBASIC5.54□□□□□ -1.52
VPS50Q96JG6 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 154.4 ms