Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 KARSP3-201ENST00000571212 1504 ntBASIC5.42□□□□□ -1.54
CLRN1P58418 MTND4P31-201ENST00000425607 1343 ntBASIC5.42□□□□□ -1.54
CLRN1P58418 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CLRN1P58418 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLRN1P58418 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CLRN1P58418 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLRN1P58418 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.41□□□□□ -1.54
CLRN1P58418 AC005261.2-201ENST00000593427 4258 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CLRN1P58418 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.41□□□□□ -1.54
CLRN1P58418 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CLRN1P58418 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.41□□□□□ -1.54
CLRN1P58418 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.41□□□□□ -1.54
CLRN1P58418 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLRN1P58418 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLRN1P58418 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.41□□□□□ -1.54
CLRN1P58418 AC016583.1-201ENST00000624221 2431 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 AL391994.1-201ENST00000254724 282 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLRN1P58418 OR10R3P-201ENST00000361688 942 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 RN7SKP250-201ENST00000363924 321 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 TAF9BP1-201ENST00000396646 746 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.41□□□□□ -1.54
CLRN1P58418 RPL7P58-201ENST00000402913 758 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 RNA5SP80-201ENST00000410475 111 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.41□□□□□ -1.54
CLRN1P58418 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 P2RY10P2-201ENST00000416730 913 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 RPL35AP31-201ENST00000418340 337 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.41□□□□□ -1.54
CLRN1P58418 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.41□□□□□ -1.54
CLRN1P58418 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.41□□□□□ -1.54
CLRN1P58418 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.41□□□□□ -1.54
CLRN1P58418 RPL12P12-201ENST00000424633 501 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.41□□□□□ -1.54
CLRN1P58418 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLRN1P58418 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.41□□□□□ -1.54
CLRN1P58418 PRELID3BP10-201ENST00000431957 584 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.41□□□□□ -1.54
CLRN1P58418 AL590004.3-202ENST00000445883 451 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.41□□□□□ -1.54
CLRN1P58418 RPL31P44-201ENST00000447680 377 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.41□□□□□ -1.54
CLRN1P58418 AC073476.1-201ENST00000452854 407 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 AC002553.3-201ENST00000453002 341 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 NDUFA12P1-201ENST00000455914 406 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.41□□□□□ -1.54
CLRN1P58418 RPL7P48-201ENST00000461513 746 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.41□□□□□ -1.54
CLRN1P58418 AC073522.1-201ENST00000483312 377 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 AC068724.1-201ENST00000487100 792 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 RPL23AP40-201ENST00000487630 390 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 WBP1LP4-201ENST00000505043 344 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC5.41□□□□□ -1.54
CLRN1P58418 AC008945.1-201ENST00000505144 499 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 AC073358.1-201ENST00000505671 684 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.41□□□□□ -1.54
CLRN1P58418 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.41□□□□□ -1.54
CLRN1P58418 AC005178.1-201ENST00000508392 440 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 AC010587.2-201ENST00000511727 448 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.41□□□□□ -1.54
CLRN1P58418 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC5.41□□□□□ -1.54
CLRN1P58418 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.41□□□□□ -1.54
CLRN1P58418 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
CLRN1P58418 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.41□□□□□ -1.54
CLRN1P58418 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.41□□□□□ -1.54
CLRN1P58418 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.41□□□□□ -1.54
CLRN1P58418 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC5.41□□□□□ -1.54
CLRN1P58418 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.41□□□□□ -1.54
CLRN1P58418 AP003033.2-201ENST00000528901 805 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 AC008083.2-201ENST00000546707 476 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC5.41□□□□□ -1.54
CLRN1P58418 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.41□□□□□ -1.54
CLRN1P58418 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.41□□□□□ -1.54
CLRN1P58418 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.41□□□□□ -1.54
CLRN1P58418 AC018558.5-201ENST00000565840 952 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 AL078601.3-201ENST00000573303 535 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 ARGFXP2-201ENST00000579304 949 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 MIR4666A-201ENST00000580160 79 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.41□□□□□ -1.54
CLRN1P58418 RSL24D1P11-201ENST00000591045 491 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 AC011500.1-201ENST00000601963 469 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.41□□□□□ -1.54
CLRN1P58418 AC069545.1-201ENST00000605671 358 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 AC097505.1-201ENST00000610199 565 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 OR8G7P-201ENST00000616658 848 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 AL607023.1-201ENST00000620045 248 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CLRN1P58418 AC005225.5-201ENST00000623547 2225 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.41□□□□□ -1.54
CLRN1P58418 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.41□□□□□ -1.54
CLRN1P58418 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLRN1P58418 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLRN1P58418 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLRN1P58418 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.41□□□□□ -1.54
CLRN1P58418 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLRN1P58418 AC025263.3-201ENST00000622965 1396 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 AC022164.1-201ENST00000568767 2673 ntBASIC5.41□□□□□ -1.54
CLRN1P58418 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CLRN1P58418 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms