Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NEK3P51956 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.86□□□□□ -1.47
NEK3P51956 ELOCP12-201ENST00000458706 328 ntBASIC5.86□□□□□ -1.47
NEK3P51956 RPS17P15-201ENST00000475609 349 ntBASIC5.86□□□□□ -1.47
NEK3P51956 EIF1P7-201ENST00000487533 337 ntBASIC5.86□□□□□ -1.47
NEK3P51956 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.86□□□□□ -1.47
NEK3P51956 GLUD1P3-202ENST00000508551 200 ntBASIC5.86□□□□□ -1.47
NEK3P51956 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.86□□□□□ -1.47
NEK3P51956 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.86□□□□□ -1.47
NEK3P51956 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NEK3P51956 AC084824.2-201ENST00000548906 345 ntBASIC5.86□□□□□ -1.47
NEK3P51956 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.86□□□□□ -1.47
NEK3P51956 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.86□□□□□ -1.47
NEK3P51956 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.86□□□□□ -1.47
NEK3P51956 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.86□□□□□ -1.47
NEK3P51956 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.86□□□□□ -1.47
NEK3P51956 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.86□□□□□ -1.47
NEK3P51956 RN7SL787P-201ENST00000613000 284 ntBASIC5.86□□□□□ -1.47
NEK3P51956 RN7SL544P-201ENST00000617232 284 ntBASIC5.86□□□□□ -1.47
NEK3P51956 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NEK3P51956 RN7SL763P-201ENST00000620922 284 ntBASIC5.86□□□□□ -1.47
NEK3P51956 AC016717.3-201ENST00000624730 554 ntBASIC5.86□□□□□ -1.47
NEK3P51956 AP003485.1-201ENST00000625093 753 ntBASIC5.86□□□□□ -1.47
NEK3P51956 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.86□□□□□ -1.47
NEK3P51956 AC087565.3-203ENST00000641018 837 ntBASIC5.86□□□□□ -1.47
NEK3P51956 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
NEK3P51956 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
NEK3P51956 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.86□□□□□ -1.47
NEK3P51956 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
NEK3P51956 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
NEK3P51956 AP000756.2-201ENST00000624168 2567 ntBASIC5.86□□□□□ -1.47
NEK3P51956 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NEK3P51956 MAPK10-328ENST00000641553 4009 ntBASIC5.86□□□□□ -1.47
NEK3P51956 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
NEK3P51956 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
NEK3P51956 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.85□□□□□ -1.47
NEK3P51956 AC046144.1-201ENST00000478559 1853 ntBASIC5.85□□□□□ -1.47
NEK3P51956 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.85□□□□□ -1.47
NEK3P51956 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.85□□□□□ -1.47
NEK3P51956 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.85□□□□□ -1.47
NEK3P51956 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
NEK3P51956 AC022031.1-201ENST00000585985 2593 ntBASIC5.85□□□□□ -1.47
NEK3P51956 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.85□□□□□ -1.47
NEK3P51956 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NEK3P51956 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.85□□□□□ -1.47
NEK3P51956 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NEK3P51956 RN7SKP145-201ENST00000363291 303 ntBASIC5.85□□□□□ -1.47
NEK3P51956 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.85□□□□□ -1.47
NEK3P51956 PEX12P1-201ENST00000400284 1048 ntBASIC5.85□□□□□ -1.47
NEK3P51956 HMGB1P20-201ENST00000402555 677 ntBASIC5.85□□□□□ -1.47
NEK3P51956 RPL7P27-201ENST00000403775 720 ntBASIC5.85□□□□□ -1.47
NEK3P51956 OR2AT2P-201ENST00000413438 905 ntBASIC5.85□□□□□ -1.47
NEK3P51956 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.85□□□□□ -1.47
NEK3P51956 AC106883.1-201ENST00000418805 562 ntBASIC5.85□□□□□ -1.47
NEK3P51956 AC073069.1-201ENST00000428657 441 ntBASIC5.85□□□□□ -1.47
NEK3P51956 AL022331.1-201ENST00000429025 477 ntBASIC5.85□□□□□ -1.47
NEK3P51956 CDY14P-201ENST00000431260 1014 ntBASIC5.85□□□□□ -1.47
NEK3P51956 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.85□□□□□ -1.47
NEK3P51956 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.85□□□□□ -1.47
NEK3P51956 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.85□□□□□ -1.47
NEK3P51956 CDY12P-201ENST00000440679 1015 ntBASIC5.85□□□□□ -1.47
NEK3P51956 CDY13P-201ENST00000445813 1015 ntBASIC5.85□□□□□ -1.47
NEK3P51956 AC023271.1-201ENST00000445936 1090 ntBASIC5.85□□□□□ -1.47
NEK3P51956 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.85□□□□□ -1.47
NEK3P51956 MTND2P8-201ENST00000450555 1025 ntBASIC5.85□□□□□ -1.47
NEK3P51956 CDY23P-201ENST00000451661 1014 ntBASIC5.85□□□□□ -1.47
NEK3P51956 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.85□□□□□ -1.47
NEK3P51956 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.85□□□□□ -1.47
NEK3P51956 RNU1-88P-201ENST00000459274 128 ntBASIC5.85□□□□□ -1.47
NEK3P51956 AC018638.3-201ENST00000461273 132 ntBASIC5.85□□□□□ -1.47
NEK3P51956 AC018635.1-201ENST00000468292 1030 ntBASIC5.85□□□□□ -1.47
NEK3P51956 RN7SL717P-201ENST00000478343 297 ntBASIC5.85□□□□□ -1.47
NEK3P51956 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.85□□□□□ -1.47
NEK3P51956 AC010306.1-201ENST00000523223 1117 ntBASIC5.85□□□□□ -1.47
NEK3P51956 IGLV3-30-201ENST00000524362 298 ntBASIC5.85□□□□□ -1.47
NEK3P51956 AC124293.1-201ENST00000530034 493 ntBASIC5.85□□□□□ -1.47
NEK3P51956 AC027544.3-201ENST00000535082 757 ntBASIC5.85□□□□□ -1.47
NEK3P51956 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.85□□□□□ -1.47
NEK3P51956 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.85□□□□□ -1.47
NEK3P51956 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.85□□□□□ -1.47
NEK3P51956 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.85□□□□□ -1.47
NEK3P51956 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.85□□□□□ -1.47
NEK3P51956 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.85□□□□□ -1.47
NEK3P51956 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.85□□□□□ -1.47
NEK3P51956 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.85□□□□□ -1.47
NEK3P51956 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NEK3P51956 AC002069.2-201ENST00000603580 883 ntBASIC5.85□□□□□ -1.47
NEK3P51956 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.85□□□□□ -1.47
NEK3P51956 HIRAP1-201ENST00000605318 787 ntBASIC5.85□□□□□ -1.47
NEK3P51956 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.85□□□□□ -1.47
NEK3P51956 RNA5SP440-201ENST00000612665 119 ntBASIC5.85□□□□□ -1.47
NEK3P51956 AC091046.2-201ENST00000620775 665 ntBASIC5.85□□□□□ -1.47
NEK3P51956 AC010608.3-201ENST00000625048 527 ntBASIC5.85□□□□□ -1.47
NEK3P51956 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NEK3P51956 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.85□□□□□ -1.47
NEK3P51956 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.85□□□□□ -1.47
NEK3P51956 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.85□□□□□ -1.47
NEK3P51956 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NEK3P51956 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NEK3P51956 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms