Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC104687.2-201ENST00000604442 342 ntBASIC4.96□□□□□ -1.62
HMGCLP35914 AL121890.2-201ENST00000617644 465 ntBASIC4.96□□□□□ -1.62
HMGCLP35914 MIR6719-201ENST00000622428 87 ntBASIC4.96□□□□□ -1.62
HMGCLP35914 AC091905.4-201ENST00000623432 202 ntBASIC4.96□□□□□ -1.62
HMGCLP35914 AL353662.3-201ENST00000625131 237 ntBASIC4.96□□□□□ -1.62
HMGCLP35914 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.96□□□□□ -1.62
HMGCLP35914 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGCLP35914 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.96□□□□□ -1.62
HMGCLP35914 AC073869.10-201ENST00000642016 354 ntBASIC4.96□□□□□ -1.62
HMGCLP35914 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.96□□□□□ -1.62
HMGCLP35914 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.96□□□□□ -1.62
HMGCLP35914 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HMGCLP35914 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HMGCLP35914 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HMGCLP35914 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.96□□□□□ -1.62
HMGCLP35914 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HMGCLP35914 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCLP35914 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCLP35914 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCLP35914 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
HMGCLP35914 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCLP35914 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.95□□□□□ -1.62
HMGCLP35914 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCLP35914 AL034379.1-201ENST00000423216 253 ntBASIC4.95□□□□□ -1.62
HMGCLP35914 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.95□□□□□ -1.62
HMGCLP35914 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCLP35914 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.95□□□□□ -1.62
HMGCLP35914 OR52Y1P-201ENST00000452418 828 ntBASIC4.95□□□□□ -1.62
HMGCLP35914 AC093166.2-201ENST00000455969 1017 ntBASIC4.95□□□□□ -1.62
HMGCLP35914 RNU7-157P-201ENST00000459600 66 ntBASIC4.95□□□□□ -1.62
HMGCLP35914 RN7SL515P-201ENST00000463999 297 ntBASIC4.95□□□□□ -1.62
HMGCLP35914 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.95□□□□□ -1.62
HMGCLP35914 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.95□□□□□ -1.62
HMGCLP35914 RN7SL808P-201ENST00000496066 299 ntBASIC4.95□□□□□ -1.62
HMGCLP35914 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.95□□□□□ -1.62
HMGCLP35914 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCLP35914 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.95□□□□□ -1.62
HMGCLP35914 RPS27AP18-201ENST00000515536 459 ntBASIC4.95□□□□□ -1.62
HMGCLP35914 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.95□□□□□ -1.62
HMGCLP35914 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.95□□□□□ -1.62
HMGCLP35914 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.95□□□□□ -1.62
HMGCLP35914 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.95□□□□□ -1.62
HMGCLP35914 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCLP35914 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.95□□□□□ -1.62
HMGCLP35914 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.95□□□□□ -1.62
HMGCLP35914 NPM1P45-201ENST00000583151 559 ntBASIC4.95□□□□□ -1.62
HMGCLP35914 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.95□□□□□ -1.62
HMGCLP35914 AC211433.2-201ENST00000608433 387 ntBASIC4.95□□□□□ -1.62
HMGCLP35914 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.95□□□□□ -1.62
HMGCLP35914 AP001521.2-201ENST00000608772 546 ntBASIC4.95□□□□□ -1.62
HMGCLP35914 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.95□□□□□ -1.62
HMGCLP35914 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCLP35914 MTCO1P8-201ENST00000416914 1523 ntBASIC4.95□□□□□ -1.62
HMGCLP35914 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCLP35914 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCLP35914 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCLP35914 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCLP35914 AC083843.3-201ENST00000623679 2186 ntBASIC4.95□□□□□ -1.62
HMGCLP35914 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCLP35914 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCLP35914 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCLP35914 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HMGCLP35914 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.95□□□□□ -1.62
HMGCLP35914 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.94□□□□□ -1.62
HMGCLP35914 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.94□□□□□ -1.62
HMGCLP35914 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMGCLP35914 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
HMGCLP35914 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMGCLP35914 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMGCLP35914 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.94□□□□□ -1.62
HMGCLP35914 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMGCLP35914 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HMGCLP35914 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMGCLP35914 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HMGCLP35914 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HMGCLP35914 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HMGCLP35914 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.94□□□□□ -1.62
HMGCLP35914 RN7SKP95-201ENST00000362860 303 ntBASIC4.94□□□□□ -1.62
HMGCLP35914 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HMGCLP35914 AC005522.1-201ENST00000395416 346 ntBASIC4.94□□□□□ -1.62
HMGCLP35914 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
HMGCLP35914 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.94□□□□□ -1.62
HMGCLP35914 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.94□□□□□ -1.62
HMGCLP35914 TRGV7-201ENST00000427089 353 ntBASIC4.94□□□□□ -1.62
HMGCLP35914 RBMY2QP-201ENST00000429799 1147 ntBASIC4.94□□□□□ -1.62
HMGCLP35914 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.94□□□□□ -1.62
HMGCLP35914 RPL7P11-201ENST00000437586 658 ntBASIC4.94□□□□□ -1.62
HMGCLP35914 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.94□□□□□ -1.62
HMGCLP35914 TRY2P-201ENST00000448860 689 ntBASIC4.94□□□□□ -1.62
HMGCLP35914 AP000942.1-201ENST00000463969 747 ntBASIC4.94□□□□□ -1.62
HMGCLP35914 RN7SL329P-201ENST00000467740 299 ntBASIC4.94□□□□□ -1.62
HMGCLP35914 RN7SL346P-201ENST00000491561 294 ntBASIC4.94□□□□□ -1.62
HMGCLP35914 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.94□□□□□ -1.62
HMGCLP35914 MRPS33P2-201ENST00000507850 322 ntBASIC4.94□□□□□ -1.62
HMGCLP35914 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.94□□□□□ -1.62
HMGCLP35914 Y_RNA.719-201ENST00000517156 106 ntBASIC4.94□□□□□ -1.62
HMGCLP35914 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.94□□□□□ -1.62
HMGCLP35914 OR5AZ1P-201ENST00000527448 943 ntBASIC4.94□□□□□ -1.62
HMGCLP35914 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.94□□□□□ -1.62
HMGCLP35914 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms