Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AP005205.1-201ENST00000563503 508 ntBASIC7.13□□□□□ -1.27
LIG1P18858 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC7.13□□□□□ -1.27
LIG1P18858 AP002884.5-201ENST00000595053 1132 ntBASIC7.13□□□□□ -1.27
LIG1P18858 AC022146.1-201ENST00000595307 847 ntBASIC7.13□□□□□ -1.27
LIG1P18858 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.13□□□□□ -1.27
LIG1P18858 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC7.13□□□□□ -1.27
LIG1P18858 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC7.13□□□□□ -1.27
LIG1P18858 AL136097.3-201ENST00000611097 505 ntBASIC7.13□□□□□ -1.27
LIG1P18858 AL139418.1-201ENST00000613613 177 ntBASIC7.13□□□□□ -1.27
LIG1P18858 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC7.13□□□□□ -1.27
LIG1P18858 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC7.13□□□□□ -1.27
LIG1P18858 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC7.13□□□□□ -1.27
LIG1P18858 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LIG1P18858 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC7.13□□□□□ -1.27
LIG1P18858 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LIG1P18858 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC7.12□□□□□ -1.27
LIG1P18858 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
LIG1P18858 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC7.12□□□□□ -1.27
LIG1P18858 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LIG1P18858 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LIG1P18858 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LIG1P18858 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
LIG1P18858 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LIG1P18858 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LIG1P18858 RNA5SP232-201ENST00000364144 119 ntBASIC7.12□□□□□ -1.27
LIG1P18858 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.12□□□□□ -1.27
LIG1P18858 DEFB108C-201ENST00000400154 252 ntBASIC7.12□□□□□ -1.27
LIG1P18858 RNU6-757P-201ENST00000410334 100 ntBASIC7.12□□□□□ -1.27
LIG1P18858 PGBD4P8-201ENST00000412993 562 ntBASIC7.12□□□□□ -1.27
LIG1P18858 AC016831.2-201ENST00000417179 352 ntBASIC7.12□□□□□ -1.27
LIG1P18858 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC7.12□□□□□ -1.27
LIG1P18858 AC016027.5-201ENST00000427227 210 ntBASIC7.12□□□□□ -1.27
LIG1P18858 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC7.12□□□□□ -1.27
LIG1P18858 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC7.12□□□□□ -1.27
LIG1P18858 ARMC4P1-201ENST00000438905 707 ntBASIC7.12□□□□□ -1.27
LIG1P18858 AL591503.2-201ENST00000442314 1005 ntBASIC7.12□□□□□ -1.27
LIG1P18858 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC7.12□□□□□ -1.27
LIG1P18858 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7.12□□□□□ -1.27
LIG1P18858 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
LIG1P18858 SETP11-201ENST00000473027 690 ntBASIC7.12□□□□□ -1.27
LIG1P18858 RN7SL741P-201ENST00000482473 289 ntBASIC7.12□□□□□ -1.27
LIG1P18858 GM2AP2-201ENST00000491764 562 ntBASIC7.12□□□□□ -1.27
LIG1P18858 RPS27P20-201ENST00000492051 246 ntBASIC7.12□□□□□ -1.27
LIG1P18858 AL024509.2-201ENST00000493462 493 ntBASIC7.12□□□□□ -1.27
LIG1P18858 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC7.12□□□□□ -1.27
LIG1P18858 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.12□□□□□ -1.27
LIG1P18858 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC7.12□□□□□ -1.27
LIG1P18858 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC7.12□□□□□ -1.27
LIG1P18858 RNA5SP400-201ENST00000517155 111 ntBASIC7.12□□□□□ -1.27
LIG1P18858 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.12□□□□□ -1.27
LIG1P18858 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC7.12□□□□□ -1.27
LIG1P18858 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.12□□□□□ -1.27
LIG1P18858 AC008429.4-201ENST00000521201 182 ntBASIC7.12□□□□□ -1.27
LIG1P18858 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LIG1P18858 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC7.12□□□□□ -1.27
LIG1P18858 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC7.12□□□□□ -1.27
LIG1P18858 AC116553.2-201ENST00000564203 463 ntBASIC7.12□□□□□ -1.27
LIG1P18858 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC7.12□□□□□ -1.27
LIG1P18858 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC7.12□□□□□ -1.27
LIG1P18858 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.12□□□□□ -1.27
LIG1P18858 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC7.12□□□□□ -1.27
LIG1P18858 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LIG1P18858 AL357562.1-201ENST00000624911 609 ntBASIC7.12□□□□□ -1.27
LIG1P18858 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC7.12□□□□□ -1.27
LIG1P18858 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC7.12□□□□□ -1.27
LIG1P18858 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
LIG1P18858 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
LIG1P18858 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC7.12□□□□□ -1.27
LIG1P18858 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LIG1P18858 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
LIG1P18858 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
LIG1P18858 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LIG1P18858 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LIG1P18858 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
LIG1P18858 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.11□□□□□ -1.27
LIG1P18858 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LIG1P18858 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC7.11□□□□□ -1.27
LIG1P18858 AC017007.4-201ENST00000503353 1352 ntBASIC7.11□□□□□ -1.27
LIG1P18858 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.11□□□□□ -1.27
LIG1P18858 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LIG1P18858 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LIG1P18858 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LIG1P18858 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC7.11□□□□□ -1.27
LIG1P18858 Y_RNA.192-201ENST00000363977 102 ntBASIC7.11□□□□□ -1.27
LIG1P18858 RNU6-31P-201ENST00000384388 108 ntBASIC7.11□□□□□ -1.27
LIG1P18858 U3.23-201ENST00000391132 200 ntBASIC7.11□□□□□ -1.27
LIG1P18858 PSMA6P1-201ENST00000400275 741 ntBASIC7.11□□□□□ -1.27
LIG1P18858 RNU6-920P-201ENST00000410926 92 ntBASIC7.11□□□□□ -1.27
LIG1P18858 MTND1P21-201ENST00000412991 285 ntBASIC7.11□□□□□ -1.27
LIG1P18858 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC7.11□□□□□ -1.27
LIG1P18858 CDK8P2-201ENST00000415020 547 ntBASIC7.11□□□□□ -1.27
LIG1P18858 MTCYBP38-201ENST00000417160 1123 ntBASIC7.11□□□□□ -1.27
LIG1P18858 AC023128.2-201ENST00000420880 1223 ntBASIC7.11□□□□□ -1.27
LIG1P18858 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC7.11□□□□□ -1.27
LIG1P18858 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.11□□□□□ -1.27
LIG1P18858 VN1R20P-201ENST00000425215 966 ntBASIC7.11□□□□□ -1.27
LIG1P18858 MTND4P28-201ENST00000426217 387 ntBASIC7.11□□□□□ -1.27
LIG1P18858 MTCO2P19-201ENST00000427513 598 ntBASIC7.11□□□□□ -1.27
LIG1P18858 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC7.11□□□□□ -1.27
LIG1P18858 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms