Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC6P09630 SAMMSON-226ENST00000642089 1582 ntBASIC5.72□□□□□ -1.49
HOXC6P09630 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
HOXC6P09630 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC6P09630 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC6P09630 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
HOXC6P09630 MTCO1P22-201ENST00000604619 1360 ntBASIC5.72□□□□□ -1.49
HOXC6P09630 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
HOXC6P09630 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.72□□□□□ -1.49
HOXC6P09630 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.72□□□□□ -1.49
HOXC6P09630 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC6P09630 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC6P09630 AC068538.1-201ENST00000376856 336 ntBASIC5.72□□□□□ -1.49
HOXC6P09630 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.72□□□□□ -1.49
HOXC6P09630 RPL18P10-201ENST00000425606 538 ntBASIC5.72□□□□□ -1.49
HOXC6P09630 FAR1P1-201ENST00000427163 934 ntBASIC5.72□□□□□ -1.49
HOXC6P09630 RPL7AP49-201ENST00000429522 581 ntBASIC5.72□□□□□ -1.49
HOXC6P09630 AL591438.1-201ENST00000433508 581 ntBASIC5.72□□□□□ -1.49
HOXC6P09630 AC090018.1-201ENST00000434369 367 ntBASIC5.72□□□□□ -1.49
HOXC6P09630 MAPRE1P3-201ENST00000435438 796 ntBASIC5.72□□□□□ -1.49
HOXC6P09630 AL691517.1-201ENST00000440833 1235 ntBASIC5.72□□□□□ -1.49
HOXC6P09630 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXC6P09630 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.72□□□□□ -1.49
HOXC6P09630 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HOXC6P09630 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXC6P09630 AC010326.1-201ENST00000462726 602 ntBASIC5.72□□□□□ -1.49
HOXC6P09630 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.72□□□□□ -1.49
HOXC6P09630 AC008628.1-201ENST00000508663 265 ntBASIC5.72□□□□□ -1.49
HOXC6P09630 RNU6-964P-201ENST00000516524 69 ntBASIC5.72□□□□□ -1.49
HOXC6P09630 AC021733.2-201ENST00000518830 497 ntBASIC5.72□□□□□ -1.49
HOXC6P09630 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.72□□□□□ -1.49
HOXC6P09630 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.72□□□□□ -1.49
HOXC6P09630 MORF4L1P3-201ENST00000525966 950 ntBASIC5.72□□□□□ -1.49
HOXC6P09630 BNIP3P27-201ENST00000599991 412 ntBASIC5.72□□□□□ -1.49
HOXC6P09630 AC020910.3-201ENST00000603701 874 ntBASIC5.72□□□□□ -1.49
HOXC6P09630 AL713998.2-201ENST00000604538 1198 ntBASIC5.72□□□□□ -1.49
HOXC6P09630 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXC6P09630 AL162574.1-201ENST00000615702 950 ntBASIC5.72□□□□□ -1.49
HOXC6P09630 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC6P09630 AC099654.2-201ENST00000433031 1980 ntBASIC5.72□□□□□ -1.49
HOXC6P09630 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC6P09630 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
HOXC6P09630 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXC6P09630 AC068446.1-201ENST00000556425 1549 ntBASIC5.72□□□□□ -1.49
HOXC6P09630 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC6P09630 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HOXC6P09630 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
HOXC6P09630 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
HOXC6P09630 AP002512.4-202ENST00000641599 4530 ntBASIC5.71□□□□□ -1.49
HOXC6P09630 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
HOXC6P09630 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.49
HOXC6P09630 ABCC13-202ENST00000463099 3842 ntBASIC5.71□□□□□ -1.49
HOXC6P09630 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.71□□□□□ -1.49
HOXC6P09630 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC6P09630 Z98755.1-201ENST00000407015 1384 ntBASIC5.71□□□□□ -1.5
HOXC6P09630 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXC6P09630 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXC6P09630 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC6P09630 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
HOXC6P09630 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC6P09630 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXC6P09630 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXC6P09630 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.71□□□□□ -1.5
HOXC6P09630 RNA5SP332-201ENST00000391063 115 ntBASIC5.71□□□□□ -1.5
HOXC6P09630 ATP5HP3-201ENST00000396994 486 ntBASIC5.71□□□□□ -1.5
HOXC6P09630 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC6P09630 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC6P09630 RPS27AP7-201ENST00000422792 455 ntBASIC5.71□□□□□ -1.5
HOXC6P09630 CR848007.2-201ENST00000424918 787 ntBASIC5.71□□□□□ -1.5
HOXC6P09630 MTCYBP32-201ENST00000427945 1084 ntBASIC5.71□□□□□ -1.5
HOXC6P09630 UBE2V1P6-201ENST00000430840 422 ntBASIC5.71□□□□□ -1.5
HOXC6P09630 NPM1P18-201ENST00000434232 732 ntBASIC5.71□□□□□ -1.5
HOXC6P09630 AL158053.1-201ENST00000441503 453 ntBASIC5.71□□□□□ -1.5
HOXC6P09630 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXC6P09630 AC090804.1-201ENST00000448870 490 ntBASIC5.71□□□□□ -1.5
HOXC6P09630 BX842559.2-201ENST00000451418 605 ntBASIC5.71□□□□□ -1.5
HOXC6P09630 AURKAPS2-201ENST00000454983 333 ntBASIC5.71□□□□□ -1.5
HOXC6P09630 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXC6P09630 RPS23P7-201ENST00000466210 444 ntBASIC5.71□□□□□ -1.5
HOXC6P09630 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXC6P09630 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC6P09630 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC6P09630 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXC6P09630 AC106806.2-201ENST00000509365 500 ntBASIC5.71□□□□□ -1.5
HOXC6P09630 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC6P09630 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC6P09630 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.71□□□□□ -1.5
HOXC6P09630 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXC6P09630 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC6P09630 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXC6P09630 BNIP3P40-201ENST00000596017 556 ntBASIC5.71□□□□□ -1.5
HOXC6P09630 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXC6P09630 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXC6P09630 AC087468.1-201ENST00000604365 630 ntBASIC5.71□□□□□ -1.5
HOXC6P09630 AC005377.1-201ENST00000605126 456 ntBASIC5.71□□□□□ -1.5
HOXC6P09630 AC016717.3-201ENST00000624730 554 ntBASIC5.71□□□□□ -1.5
HOXC6P09630 AC008079.2-201ENST00000623543 20396 ntBASIC5.71□□□□□ -1.5
HOXC6P09630 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXC6P09630 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC6P09630 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms