Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.39□□□□□ -1.55
TPM1P09493 NDUFA5P5-201ENST00000468361 342 ntBASIC5.39□□□□□ -1.55
TPM1P09493 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TPM1P09493 RPL23AP37-201ENST00000479658 549 ntBASIC5.39□□□□□ -1.55
TPM1P09493 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.39□□□□□ -1.55
TPM1P09493 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.39□□□□□ -1.55
TPM1P09493 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.39□□□□□ -1.55
TPM1P09493 AC024405.1-201ENST00000532521 1042 ntBASIC5.39□□□□□ -1.55
TPM1P09493 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.39□□□□□ -1.55
TPM1P09493 AC135626.1-201ENST00000556983 435 ntBASIC5.39□□□□□ -1.55
TPM1P09493 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.39□□□□□ -1.55
TPM1P09493 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.39□□□□□ -1.55
TPM1P09493 AC109309.2-201ENST00000612597 332 ntBASIC5.39□□□□□ -1.55
TPM1P09493 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.39□□□□□ -1.55
TPM1P09493 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.39□□□□□ -1.55
TPM1P09493 AC090527.3-201ENST00000619041 548 ntBASIC5.39□□□□□ -1.55
TPM1P09493 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.39□□□□□ -1.55
TPM1P09493 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
TPM1P09493 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.39□□□□□ -1.55
TPM1P09493 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
TPM1P09493 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
TPM1P09493 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
TPM1P09493 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TPM1P09493 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TPM1P09493 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
TPM1P09493 AC104118.1-201ENST00000607625 1589 ntBASIC5.38□□□□□ -1.55
TPM1P09493 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
TPM1P09493 AC107021.2-201ENST00000567714 2095 ntBASIC5.38□□□□□ -1.55
TPM1P09493 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TPM1P09493 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TPM1P09493 AL021331.1-201ENST00000402817 582 ntBASIC5.38□□□□□ -1.55
TPM1P09493 AL139039.2-201ENST00000407436 479 ntBASIC5.38□□□□□ -1.55
TPM1P09493 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.38□□□□□ -1.55
TPM1P09493 GTF2IP2-201ENST00000424290 697 ntBASIC5.38□□□□□ -1.55
TPM1P09493 RPS27P18-201ENST00000431701 247 ntBASIC5.38□□□□□ -1.55
TPM1P09493 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.38□□□□□ -1.55
TPM1P09493 AC004938.1-201ENST00000438468 308 ntBASIC5.38□□□□□ -1.55
TPM1P09493 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.38□□□□□ -1.55
TPM1P09493 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.38□□□□□ -1.55
TPM1P09493 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.38□□□□□ -1.55
TPM1P09493 RN7SL817P-201ENST00000480777 288 ntBASIC5.38□□□□□ -1.55
TPM1P09493 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.38□□□□□ -1.55
TPM1P09493 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.38□□□□□ -1.55
TPM1P09493 AC125612.1-201ENST00000547580 377 ntBASIC5.38□□□□□ -1.55
TPM1P09493 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.38□□□□□ -1.55
TPM1P09493 ATP5J2P6-201ENST00000565203 266 ntBASIC5.38□□□□□ -1.55
TPM1P09493 AL499605.1-201ENST00000604628 403 ntBASIC5.38□□□□□ -1.55
TPM1P09493 AC244517.3-201ENST00000616254 1235 ntBASIC5.38□□□□□ -1.55
TPM1P09493 AC234782.5-201ENST00000617723 324 ntBASIC5.38□□□□□ -1.55
TPM1P09493 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.38□□□□□ -1.55
TPM1P09493 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.38□□□□□ -1.55
TPM1P09493 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TPM1P09493 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TPM1P09493 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TPM1P09493 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
TPM1P09493 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.38□□□□□ -1.55
TPM1P09493 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
TPM1P09493 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TPM1P09493 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.38□□□□□ -1.55
TPM1P09493 TMSB4XP4-201ENST00000323496 618 ntBASIC5.37□□□□□ -1.55
TPM1P09493 MIR195-201ENST00000385194 87 ntBASIC5.37□□□□□ -1.55
TPM1P09493 AL136116.2-201ENST00000404020 785 ntBASIC5.37□□□□□ -1.55
TPM1P09493 U3.35-201ENST00000408405 208 ntBASIC5.37□□□□□ -1.55
TPM1P09493 MTND4LP21-201ENST00000415303 295 ntBASIC5.37□□□□□ -1.55
TPM1P09493 RGS17P1-201ENST00000423358 553 ntBASIC5.37□□□□□ -1.55
TPM1P09493 AC108075.1-201ENST00000424692 529 ntBASIC5.37□□□□□ -1.55
TPM1P09493 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TPM1P09493 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.37□□□□□ -1.55
TPM1P09493 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
TPM1P09493 AL136038.1-201ENST00000497246 351 ntBASIC5.37□□□□□ -1.55
TPM1P09493 RN7SL558P-201ENST00000497468 299 ntBASIC5.37□□□□□ -1.55
TPM1P09493 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.37□□□□□ -1.55
TPM1P09493 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TPM1P09493 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.37□□□□□ -1.55
TPM1P09493 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.37□□□□□ -1.55
TPM1P09493 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.37□□□□□ -1.55
TPM1P09493 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.37□□□□□ -1.55
TPM1P09493 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TPM1P09493 NMNAT1P1-201ENST00000554095 876 ntBASIC5.37□□□□□ -1.55
TPM1P09493 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.37□□□□□ -1.55
TPM1P09493 AC005726.4-201ENST00000582858 458 ntBASIC5.37□□□□□ -1.55
TPM1P09493 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.37□□□□□ -1.55
TPM1P09493 AL137072.1-201ENST00000603444 466 ntBASIC5.37□□□□□ -1.55
TPM1P09493 AC015849.6-201ENST00000605454 474 ntBASIC5.37□□□□□ -1.55
TPM1P09493 AC009237.17-201ENST00000618111 748 ntBASIC5.37□□□□□ -1.55
TPM1P09493 AC127024.6-201ENST00000621598 424 ntBASIC5.37□□□□□ -1.55
TPM1P09493 AC243960.7-201ENST00000623532 707 ntBASIC5.37□□□□□ -1.55
TPM1P09493 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.37□□□□□ -1.55
TPM1P09493 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
TPM1P09493 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
TPM1P09493 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.37□□□□□ -1.55
TPM1P09493 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
TPM1P09493 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.36□□□□□ -1.55
TPM1P09493 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
TPM1P09493 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TPM1P09493 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.36□□□□□ -1.55
TPM1P09493 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TPM1P09493 SNORA66-201ENST00000384792 133 ntBASIC5.36□□□□□ -1.55
TPM1P09493 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
TPM1P09493 VDAC1P9-201ENST00000412766 841 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms