Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC6.25□□□□□ -1.41
COL5A2P05997 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL5A2P05997 PDCD6IPP1-202ENST00000622242 1064 ntBASIC6.25□□□□□ -1.41
COL5A2P05997 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL5A2P05997 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.25□□□□□ -1.41
COL5A2P05997 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.25□□□□□ -1.41
COL5A2P05997 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.25□□□□□ -1.41
COL5A2P05997 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL5A2P05997 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
COL5A2P05997 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.25□□□□□ -1.41
COL5A2P05997 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL5A2P05997 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL5A2P05997 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.24□□□□□ -1.41
COL5A2P05997 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL5A2P05997 ATP5F1P2-201ENST00000398143 760 ntBASIC6.24□□□□□ -1.41
COL5A2P05997 AC025750.1-201ENST00000399891 379 ntBASIC6.24□□□□□ -1.41
COL5A2P05997 MTND4LP17-201ENST00000414607 293 ntBASIC6.24□□□□□ -1.41
COL5A2P05997 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC6.24□□□□□ -1.41
COL5A2P05997 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC6.24□□□□□ -1.41
COL5A2P05997 RN7SL303P-201ENST00000469773 251 ntBASIC6.24□□□□□ -1.41
COL5A2P05997 RN7SL604P-201ENST00000492589 296 ntBASIC6.24□□□□□ -1.41
COL5A2P05997 PPM1AP1-201ENST00000502740 1135 ntBASIC6.24□□□□□ -1.41
COL5A2P05997 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.24□□□□□ -1.41
COL5A2P05997 AC020593.1-201ENST00000507399 299 ntBASIC6.24□□□□□ -1.41
COL5A2P05997 Y_RNA.719-201ENST00000517156 106 ntBASIC6.24□□□□□ -1.41
COL5A2P05997 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC6.24□□□□□ -1.41
COL5A2P05997 CCDC58P3-201ENST00000590792 430 ntBASIC6.24□□□□□ -1.41
COL5A2P05997 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC6.24□□□□□ -1.41
COL5A2P05997 ARF4P1-201ENST00000605447 541 ntBASIC6.24□□□□□ -1.41
COL5A2P05997 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.24□□□□□ -1.41
COL5A2P05997 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
COL5A2P05997 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.24□□□□□ -1.41
COL5A2P05997 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL5A2P05997 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL5A2P05997 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL5A2P05997 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL5A2P05997 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL5A2P05997 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL5A2P05997 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.23□□□□□ -1.41
COL5A2P05997 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.23□□□□□ -1.41
COL5A2P05997 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL5A2P05997 RNA5SP317-201ENST00000410176 116 ntBASIC6.23□□□□□ -1.41
COL5A2P05997 RNA5SP311-201ENST00000411290 116 ntBASIC6.23□□□□□ -1.41
COL5A2P05997 RPS12P10-201ENST00000427031 377 ntBASIC6.23□□□□□ -1.41
COL5A2P05997 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC6.23□□□□□ -1.41
COL5A2P05997 ACTR3P2-201ENST00000439585 1257 ntBASIC6.23□□□□□ -1.41
COL5A2P05997 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC6.23□□□□□ -1.41
COL5A2P05997 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC6.23□□□□□ -1.41
COL5A2P05997 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.23□□□□□ -1.41
COL5A2P05997 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.23□□□□□ -1.41
COL5A2P05997 RNA5SP315-201ENST00000516340 116 ntBASIC6.23□□□□□ -1.41
COL5A2P05997 RNA5SP312-201ENST00000517068 116 ntBASIC6.23□□□□□ -1.41
COL5A2P05997 AL591034.3-201ENST00000605511 685 ntBASIC6.23□□□□□ -1.41
COL5A2P05997 OR7A19P-201ENST00000608051 733 ntBASIC6.23□□□□□ -1.41
COL5A2P05997 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC6.23□□□□□ -1.41
COL5A2P05997 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL5A2P05997 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC6.23□□□□□ -1.41
COL5A2P05997 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL5A2P05997 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.23□□□□□ -1.41
COL5A2P05997 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
COL5A2P05997 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
COL5A2P05997 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC6.23□□□□□ -1.41
COL5A2P05997 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.23□□□□□ -1.41
COL5A2P05997 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC6.23□□□□□ -1.41
COL5A2P05997 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL5A2P05997 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL5A2P05997 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL5A2P05997 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL5A2P05997 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.22□□□□□ -1.41
COL5A2P05997 AL121657.1-201ENST00000327215 531 ntBASIC6.22□□□□□ -1.41
COL5A2P05997 RNU1-64P-201ENST00000365443 163 ntBASIC6.22□□□□□ -1.41
COL5A2P05997 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC6.22□□□□□ -1.41
COL5A2P05997 BMS1P19-201ENST00000433925 393 ntBASIC6.22□□□□□ -1.41
COL5A2P05997 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.22□□□□□ -1.41
COL5A2P05997 AC114755.5-201ENST00000447760 831 ntBASIC6.22□□□□□ -1.41
COL5A2P05997 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
COL5A2P05997 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC6.22□□□□□ -1.41
COL5A2P05997 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.22□□□□□ -1.41
COL5A2P05997 PRPF19P1-201ENST00000584766 898 ntBASIC6.22□□□□□ -1.41
COL5A2P05997 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC6.22□□□□□ -1.41
COL5A2P05997 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC6.22□□□□□ -1.41
COL5A2P05997 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL5A2P05997 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL5A2P05997 AC025031.4-201ENST00000621248 3271 ntBASIC6.22□□□□□ -1.41
COL5A2P05997 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL5A2P05997 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL5A2P05997 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC6.22□□□□□ -1.41
COL5A2P05997 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
COL5A2P05997 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL5A2P05997 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL5A2P05997 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.22□□□□□ -1.41
COL5A2P05997 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC6.22□□□□□ -1.41
COL5A2P05997 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.22□□□□□ -1.41
COL5A2P05997 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL5A2P05997 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC6.22□□□□□ -1.41
COL5A2P05997 AL022323.4-201ENST00000623980 13120 ntBASIC6.22□□□□□ -1.41
COL5A2P05997 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL5A2P05997 CASKP1-201ENST00000412870 582 ntBASIC6.22□□□□□ -1.41
COL5A2P05997 VN1R37P-201ENST00000419096 748 ntBASIC6.22□□□□□ -1.41
COL5A2P05997 RPS29P17-201ENST00000430795 166 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms