Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AL034374.1-201ENST00000406329 351 ntBASIC5.06□□□□□ -1.6
RIPK2O43353 RPL6P29-201ENST00000414863 865 ntBASIC5.06□□□□□ -1.6
RIPK2O43353 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.06□□□□□ -1.6
RIPK2O43353 AL133325.1-201ENST00000421090 382 ntBASIC5.06□□□□□ -1.6
RIPK2O43353 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.06□□□□□ -1.6
RIPK2O43353 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RIPK2O43353 CLNS1AP1-201ENST00000435954 682 ntBASIC5.06□□□□□ -1.6
RIPK2O43353 AC064862.4-201ENST00000442180 334 ntBASIC5.06□□□□□ -1.6
RIPK2O43353 AP000942.1-201ENST00000463969 747 ntBASIC5.06□□□□□ -1.6
RIPK2O43353 RPL21P6-201ENST00000479171 504 ntBASIC5.06□□□□□ -1.6
RIPK2O43353 RN7SL170P-201ENST00000487098 295 ntBASIC5.06□□□□□ -1.6
RIPK2O43353 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.06□□□□□ -1.6
RIPK2O43353 AC026688.1-201ENST00000520639 1168 ntBASIC5.06□□□□□ -1.6
RIPK2O43353 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.06□□□□□ -1.6
RIPK2O43353 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.06□□□□□ -1.6
RIPK2O43353 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.06□□□□□ -1.6
RIPK2O43353 AC134349.2-201ENST00000535136 910 ntBASIC5.06□□□□□ -1.6
RIPK2O43353 AC008147.3-201ENST00000548666 354 ntBASIC5.06□□□□□ -1.6
RIPK2O43353 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.06□□□□□ -1.6
RIPK2O43353 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.06□□□□□ -1.6
RIPK2O43353 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.06□□□□□ -1.6
RIPK2O43353 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RIPK2O43353 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.06□□□□□ -1.6
RIPK2O43353 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.06□□□□□ -1.6
RIPK2O43353 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.06□□□□□ -1.6
RIPK2O43353 AC123786.2-201ENST00000603459 275 ntBASIC5.06□□□□□ -1.6
RIPK2O43353 AC100767.2-201ENST00000604840 693 ntBASIC5.06□□□□□ -1.6
RIPK2O43353 AL096712.1-201ENST00000614561 159 ntBASIC5.06□□□□□ -1.6
RIPK2O43353 MIR8080-201ENST00000622224 89 ntBASIC5.06□□□□□ -1.6
RIPK2O43353 AC092159.4-201ENST00000624944 550 ntBASIC5.06□□□□□ -1.6
RIPK2O43353 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RIPK2O43353 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RIPK2O43353 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RIPK2O43353 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RIPK2O43353 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RIPK2O43353 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.06□□□□□ -1.6
RIPK2O43353 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RIPK2O43353 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RIPK2O43353 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
RIPK2O43353 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.05□□□□□ -1.6
RIPK2O43353 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
RIPK2O43353 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.05□□□□□ -1.6
RIPK2O43353 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.05□□□□□ -1.6
RIPK2O43353 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RIPK2O43353 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RIPK2O43353 LINC01109-201ENST00000603837 3081 ntBASIC5.05□□□□□ -1.6
RIPK2O43353 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RIPK2O43353 AC023490.2-201ENST00000359859 470 ntBASIC5.05□□□□□ -1.6
RIPK2O43353 RNU1-83P-201ENST00000363426 164 ntBASIC5.05□□□□□ -1.6
RIPK2O43353 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.05□□□□□ -1.6
RIPK2O43353 FABP7P1-201ENST00000424004 391 ntBASIC5.05□□□□□ -1.6
RIPK2O43353 AL158073.1-201ENST00000426848 1104 ntBASIC5.05□□□□□ -1.6
RIPK2O43353 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.05□□□□□ -1.6
RIPK2O43353 FAM96AP1-201ENST00000430879 482 ntBASIC5.05□□□□□ -1.6
RIPK2O43353 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.05□□□□□ -1.6
RIPK2O43353 AC092162.1-201ENST00000432828 434 ntBASIC5.05□□□□□ -1.6
RIPK2O43353 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.05□□□□□ -1.6
RIPK2O43353 CACYBPP1-201ENST00000438592 684 ntBASIC5.05□□□□□ -1.6
RIPK2O43353 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
RIPK2O43353 RPL31P20-201ENST00000449593 360 ntBASIC5.05□□□□□ -1.6
RIPK2O43353 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.05□□□□□ -1.6
RIPK2O43353 AC021205.1-201ENST00000468797 348 ntBASIC5.05□□□□□ -1.6
RIPK2O43353 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.05□□□□□ -1.6
RIPK2O43353 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
RIPK2O43353 AC015864.1-201ENST00000496512 544 ntBASIC5.05□□□□□ -1.6
RIPK2O43353 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.05□□□□□ -1.6
RIPK2O43353 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.05□□□□□ -1.6
RIPK2O43353 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.05□□□□□ -1.6
RIPK2O43353 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.05□□□□□ -1.6
RIPK2O43353 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.05□□□□□ -1.6
RIPK2O43353 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.05□□□□□ -1.6
RIPK2O43353 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.05□□□□□ -1.6
RIPK2O43353 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.05□□□□□ -1.6
RIPK2O43353 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.05□□□□□ -1.6
RIPK2O43353 AC069307.1-201ENST00000602820 447 ntBASIC5.05□□□□□ -1.6
RIPK2O43353 FO393422.1-201ENST00000603908 708 ntBASIC5.05□□□□□ -1.6
RIPK2O43353 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.05□□□□□ -1.6
RIPK2O43353 SUGT1P3-202ENST00000604259 383 ntBASIC5.05□□□□□ -1.6
RIPK2O43353 AC116447.1-201ENST00000613153 453 ntBASIC5.05□□□□□ -1.6
RIPK2O43353 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.05□□□□□ -1.6
RIPK2O43353 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.05□□□□□ -1.6
RIPK2O43353 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RIPK2O43353 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.05□□□□□ -1.6
RIPK2O43353 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RIPK2O43353 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.05□□□□□ -1.6
RIPK2O43353 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RIPK2O43353 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
RIPK2O43353 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RIPK2O43353 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
RIPK2O43353 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RIPK2O43353 MAPK10-304ENST00000641341 3984 ntBASIC5.05□□□□□ -1.6
RIPK2O43353 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RIPK2O43353 AP001273.1-201ENST00000624493 3152 ntBASIC5.04□□□□□ -1.6
RIPK2O43353 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.04□□□□□ -1.6
RIPK2O43353 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RIPK2O43353 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RIPK2O43353 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RIPK2O43353 RN7SKP124-201ENST00000364730 341 ntBASIC5.04□□□□□ -1.6
RIPK2O43353 SNORA70.10-201ENST00000384515 134 ntBASIC5.04□□□□□ -1.6
RIPK2O43353 MIR600-201ENST00000385007 98 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms