Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
FOXN3O00409 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
FOXN3O00409 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
FOXN3O00409 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.86□□□□□ -1.47
FOXN3O00409 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
FOXN3O00409 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.86□□□□□ -1.47
FOXN3O00409 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
FOXN3O00409 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
FOXN3O00409 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
FOXN3O00409 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
FOXN3O00409 CCT8P1-201ENST00000413611 1657 ntBASIC5.86□□□□□ -1.47
FOXN3O00409 SOCS5P3-201ENST00000425115 1576 ntBASIC5.86□□□□□ -1.47
FOXN3O00409 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
FOXN3O00409 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
FOXN3O00409 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
FOXN3O00409 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
FOXN3O00409 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
FOXN3O00409 RNU6-185P-201ENST00000384421 107 ntBASIC5.86□□□□□ -1.47
FOXN3O00409 SNORD56.6-201ENST00000384569 71 ntBASIC5.86□□□□□ -1.47
FOXN3O00409 MIR621-201ENST00000384919 96 ntBASIC5.86□□□□□ -1.47
FOXN3O00409 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.86□□□□□ -1.47
FOXN3O00409 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.86□□□□□ -1.47
FOXN3O00409 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.86□□□□□ -1.47
FOXN3O00409 MTND6P12-201ENST00000428247 522 ntBASIC5.86□□□□□ -1.47
FOXN3O00409 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.86□□□□□ -1.47
FOXN3O00409 ETF1P3-201ENST00000430422 1160 ntBASIC5.86□□□□□ -1.47
FOXN3O00409 MTCO1P52-201ENST00000433928 531 ntBASIC5.86□□□□□ -1.47
FOXN3O00409 RPL23AP19-201ENST00000436229 369 ntBASIC5.86□□□□□ -1.47
FOXN3O00409 AL138899.2-201ENST00000439139 499 ntBASIC5.86□□□□□ -1.47
FOXN3O00409 ARF4P4-201ENST00000439608 520 ntBASIC5.86□□□□□ -1.47
FOXN3O00409 AC064862.4-201ENST00000442180 334 ntBASIC5.86□□□□□ -1.47
FOXN3O00409 AL009048.1-201ENST00000450437 298 ntBASIC5.86□□□□□ -1.47
FOXN3O00409 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.86□□□□□ -1.47
FOXN3O00409 RNU7-27P-201ENST00000459281 62 ntBASIC5.86□□□□□ -1.47
FOXN3O00409 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.86□□□□□ -1.47
FOXN3O00409 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.86□□□□□ -1.47
FOXN3O00409 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.86□□□□□ -1.47
FOXN3O00409 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
FOXN3O00409 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.86□□□□□ -1.47
FOXN3O00409 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
FOXN3O00409 AC034205.1-201ENST00000520621 638 ntBASIC5.86□□□□□ -1.47
FOXN3O00409 OR5AK3P-201ENST00000527486 1297 ntBASIC5.86□□□□□ -1.47
FOXN3O00409 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.86□□□□□ -1.47
FOXN3O00409 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.86□□□□□ -1.47
FOXN3O00409 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.86□□□□□ -1.47
FOXN3O00409 MTND1P24-201ENST00000552175 861 ntBASIC5.86□□□□□ -1.47
FOXN3O00409 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.86□□□□□ -1.47
FOXN3O00409 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.86□□□□□ -1.47
FOXN3O00409 MIR7853-201ENST00000584820 132 ntBASIC5.86□□□□□ -1.47
FOXN3O00409 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
FOXN3O00409 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.86□□□□□ -1.47
FOXN3O00409 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.86□□□□□ -1.47
FOXN3O00409 AC108738.1-201ENST00000603703 237 ntBASIC5.86□□□□□ -1.47
FOXN3O00409 AL118522.2-201ENST00000616045 615 ntBASIC5.86□□□□□ -1.47
FOXN3O00409 uc_338.7-201ENST00000621834 124 ntBASIC5.86□□□□□ -1.47
FOXN3O00409 AP001005.3-201ENST00000622049 129 ntBASIC5.86□□□□□ -1.47
FOXN3O00409 AP003497.2-201ENST00000624220 967 ntBASIC5.86□□□□□ -1.47
FOXN3O00409 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.86□□□□□ -1.47
FOXN3O00409 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
FOXN3O00409 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
FOXN3O00409 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
FOXN3O00409 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
FOXN3O00409 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
FOXN3O00409 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
FOXN3O00409 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
FOXN3O00409 BRAFP1-201ENST00000445336 2703 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
FOXN3O00409 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
FOXN3O00409 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
FOXN3O00409 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
FOXN3O00409 RBPJP2-201ENST00000618187 1444 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
FOXN3O00409 AC017007.4-201ENST00000503353 1352 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 TRIM51GP-201ENST00000534741 1350 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
FOXN3O00409 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
FOXN3O00409 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
FOXN3O00409 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
FOXN3O00409 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.85□□□□□ -1.47
FOXN3O00409 RNU5E-10P-201ENST00000363506 118 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 RNA5SP510-201ENST00000364697 99 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 RNA5SP284-201ENST00000384547 118 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 HMGB3P7-201ENST00000400214 611 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
FOXN3O00409 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.85□□□□□ -1.47
FOXN3O00409 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
FOXN3O00409 RNA5SP296-201ENST00000410523 111 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 VN1R51P-201ENST00000411675 945 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.85□□□□□ -1.47
FOXN3O00409 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.85□□□□□ -1.47
FOXN3O00409 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
FOXN3O00409 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC5.85□□□□□ -1.47
FOXN3O00409 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.85□□□□□ -1.47
FOXN3O00409 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.85□□□□□ -1.47
FOXN3O00409 OFD1P3Y-201ENST00000453312 783 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 Z95152.1-201ENST00000453556 656 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 AL035090.1-201ENST00000454835 332 ntBASIC5.85□□□□□ -1.47
FOXN3O00409 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC5.85□□□□□ -1.47
FOXN3O00409 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms