Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 TMEM161BP1-201ENST00000457388 1457 ntBASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 MAPK10-372ENST00000641954 3413 ntBASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
CHKB-CPT1BH3BT56 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 HSPD1P14-201ENST00000432666 1618 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 DHX9P1-201ENST00000436565 3076 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 NXF4-202ENST00000416098 1465 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 SNORA73.1-201ENST00000363107 205 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 PARD3-204ENST00000374768 799 ntTSL 3 BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 RNU1-89P-201ENST00000384592 164 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 RNU6-146P-201ENST00000384602 108 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 MIR128-2-201ENST00000384893 84 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 MIR105-1-201ENST00000385222 81 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AC026310.1-201ENST00000396004 378 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AL021331.1-201ENST00000402817 582 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 RHEBP3-201ENST00000411920 351 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AC245060.4-201ENST00000413293 1121 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 PPIAP23-201ENST00000420099 497 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 OR52S1P-201ENST00000427016 937 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 NDUFA5P1-201ENST00000433858 341 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 GAPDHP37-201ENST00000442317 968 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 CASP3P1-201ENST00000446037 609 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 NOP56P2-201ENST00000447491 769 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 SIAH1P1-201ENST00000479411 923 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AC022215.1-201ENST00000481770 362 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AF305872.1-201ENST00000485217 471 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AC108103.1-201ENST00000511286 446 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AC006427.1-201ENST00000514359 712 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AC098679.3-203ENST00000514881 919 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 RNU6-941P-201ENST00000516346 108 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 NARSP2-201ENST00000518524 679 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AC008802.1-201ENST00000519121 791 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AP000620.1-201ENST00000527147 504 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 UBTFL9-201ENST00000534504 1148 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 RPL41P2-201ENST00000544920 409 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 IGBP1P1-201ENST00000554337 1009 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 CHEK2P2-201ENST00000554701 672 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AC087477.6-201ENST00000559595 843 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AL360157.1-201ENST00000565962 87 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AC007346.1-201ENST00000569208 867 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AP006587.6-201ENST00000582128 1091 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AC008759.1-201ENST00000589783 983 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AL031429.2-201ENST00000602605 649 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AC083899.3-201ENST00000603413 594 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AL162431.4-201ENST00000604674 411 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AC023043.4-201ENST00000612081 449 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AL080312.2-201ENST00000613001 630 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AC009283.1-201ENST00000615852 645 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AC022960.2-201ENST00000616300 666 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AL136964.1-201ENST00000622038 2990 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 AC009452.1-201ENST00000640823 606 ntBASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 OMA1-201ENST00000371226 1935 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CHKB-CPT1BH3BT56 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms