Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.77□□□□□ -1.65
NPIPA2E9PIF3 BX284632.1-201ENST00000478218 541 ntBASIC4.77□□□□□ -1.65
NPIPA2E9PIF3 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NPIPA2E9PIF3 AC090114.3-201ENST00000479267 829 ntBASIC4.77□□□□□ -1.65
NPIPA2E9PIF3 AC058823.1-201ENST00000485315 474 ntBASIC4.77□□□□□ -1.65
NPIPA2E9PIF3 AC021193.1-201ENST00000511607 420 ntBASIC4.77□□□□□ -1.65
NPIPA2E9PIF3 SNORA70.17-201ENST00000516449 133 ntBASIC4.77□□□□□ -1.65
NPIPA2E9PIF3 AC022360.1-201ENST00000521058 340 ntBASIC4.77□□□□□ -1.65
NPIPA2E9PIF3 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.77□□□□□ -1.65
NPIPA2E9PIF3 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.77□□□□□ -1.65
NPIPA2E9PIF3 AC107918.3-201ENST00000533272 382 ntBASIC4.77□□□□□ -1.65
NPIPA2E9PIF3 MIR4436B2-201ENST00000581415 91 ntBASIC4.77□□□□□ -1.65
NPIPA2E9PIF3 MIR4436B1-201ENST00000583272 91 ntBASIC4.77□□□□□ -1.65
NPIPA2E9PIF3 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.77□□□□□ -1.65
NPIPA2E9PIF3 SNX6P1-201ENST00000601728 1224 ntBASIC4.77□□□□□ -1.65
NPIPA2E9PIF3 AC022387.2-201ENST00000604050 448 ntBASIC4.77□□□□□ -1.65
NPIPA2E9PIF3 AC116651.1-201ENST00000609724 556 ntBASIC4.77□□□□□ -1.65
NPIPA2E9PIF3 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.77□□□□□ -1.65
NPIPA2E9PIF3 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.77□□□□□ -1.65
NPIPA2E9PIF3 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
NPIPA2E9PIF3 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.77□□□□□ -1.65
NPIPA2E9PIF3 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
NPIPA2E9PIF3 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NPIPA2E9PIF3 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
NPIPA2E9PIF3 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.77□□□□□ -1.65
NPIPA2E9PIF3 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 AC110792.3-201ENST00000595906 1614 ntBASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 RN7SKP103-201ENST00000363848 320 ntBASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 MIR585-201ENST00000384887 94 ntBASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 AL133270.1-201ENST00000402635 279 ntBASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 AC017019.1-201ENST00000426129 261 ntBASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 VN1R54P-201ENST00000435210 1049 ntBASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 PSMD10P3-201ENST00000437000 448 ntBASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 NPM1P33-201ENST00000438918 872 ntBASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 AC016772.1-201ENST00000444170 1261 ntBASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 AC079168.1-201ENST00000458741 345 ntBASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 RN7SKP147-201ENST00000517154 244 ntBASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 AC013701.1-201ENST00000522657 465 ntBASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 OR8A2P-201ENST00000528631 952 ntBASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 AP000676.2-201ENST00000529711 301 ntBASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 OR1F2P-201ENST00000570470 933 ntBASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 AC009597.2-201ENST00000604659 592 ntBASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 AL136295.6-201ENST00000610486 658 ntBASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 AP003499.2-201ENST00000624100 483 ntBASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 NEAT1-202ENST00000501122 22743 ntBASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 HSPA8P17-201ENST00000427029 1382 ntBASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 AL121950.1-201ENST00000624993 2077 ntBASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.76□□□□□ -1.65
NPIPA2E9PIF3 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
NPIPA2E9PIF3 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NPIPA2E9PIF3 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NPIPA2E9PIF3 NXF4-202ENST00000416098 1465 ntBASIC4.75□□□□□ -1.65
NPIPA2E9PIF3 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.75□□□□□ -1.65
NPIPA2E9PIF3 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
NPIPA2E9PIF3 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NPIPA2E9PIF3 AC092747.4-201ENST00000620519 1861 ntBASIC4.75□□□□□ -1.65
NPIPA2E9PIF3 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NPIPA2E9PIF3 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NPIPA2E9PIF3 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NPIPA2E9PIF3 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.75□□□□□ -1.65
NPIPA2E9PIF3 RN7SKP224-201ENST00000364140 325 ntBASIC4.75□□□□□ -1.65
NPIPA2E9PIF3 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NPIPA2E9PIF3 AL136131.1-201ENST00000406079 803 ntBASIC4.75□□□□□ -1.65
NPIPA2E9PIF3 GPS2P1-201ENST00000411761 986 ntBASIC4.75□□□□□ -1.65
NPIPA2E9PIF3 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.75□□□□□ -1.65
NPIPA2E9PIF3 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.75□□□□□ -1.65
NPIPA2E9PIF3 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.75□□□□□ -1.65
NPIPA2E9PIF3 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms