Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 EIF4A1P1-201ENST00000420241 934 ntBASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 MTND2P2-201ENST00000434633 945 ntBASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 MTCYBP29-201ENST00000436327 1006 ntBASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 PA2G4P6-201ENST00000438325 1197 ntBASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 RPS29P10-201ENST00000439197 166 ntBASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 SCAND3P1-201ENST00000439854 1060 ntBASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 TIMM8BP2-201ENST00000445940 251 ntBASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 VN1R48P-201ENST00000448149 1036 ntBASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 AP006222.1-205ENST00000450734 457 ntBASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 AC114781.3-201ENST00000512083 142 ntBASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 AC104997.1-201ENST00000519761 717 ntBASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 OR7E10P-201ENST00000526420 991 ntBASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 PDCD5P1-201ENST00000543528 309 ntBASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 AL049872.1-201ENST00000556323 322 ntBASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 SULT1C2P2-201ENST00000562517 294 ntBASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 RNF138P2-201ENST00000603490 592 ntBASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 AC008814.1-201ENST00000603797 406 ntBASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 IMMP1LP3-201ENST00000604197 224 ntBASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 MIR6774-201ENST00000614651 70 ntBASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 AC008115.3-201ENST00000614874 549 ntBASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 SALL4P2-201ENST00000423288 2910 ntBASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 MTCO1P8-201ENST00000416914 1523 ntBASIC4.26□□□□□ -1.73
KCNIP3Q9Y2W7 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 AL450326.2-201ENST00000421913 1962 ntBASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 SNORA16A-201ENST00000384342 137 ntBASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 MIR708-201ENST00000390708 88 ntBASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 U3.32-201ENST00000408116 212 ntBASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 MRPL48P1-201ENST00000445390 636 ntBASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 AC098818.1-201ENST00000478593 252 ntBASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 RN7SL214P-201ENST00000487317 265 ntBASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 AC005412.2-201ENST00000492004 341 ntBASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 RN7SL441P-201ENST00000492388 296 ntBASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 AC097173.1-201ENST00000505862 819 ntBASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 AC106872.5-201ENST00000508856 1416 ntBASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 snoU109.6-201ENST00000516831 118 ntBASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 AC012400.1-201ENST00000518452 381 ntBASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 AC022784.5-201ENST00000522241 437 ntBASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 AC079600.1-201ENST00000550326 297 ntBASIC4.25□□□□□ -1.73
KCNIP3Q9Y2W7 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms