Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
BRF2Q9HAW0 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
BRF2Q9HAW0 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
BRF2Q9HAW0 MFSD8-213ENST00000641134 1327 ntBASIC5.23□□□□□ -1.57
BRF2Q9HAW0 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
BRF2Q9HAW0 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 AC109446.4-201ENST00000623235 2755 ntBASIC5.22□□□□□ -1.57
BRF2Q9HAW0 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 RN7SKP28-201ENST00000364770 305 ntBASIC5.22□□□□□ -1.57
BRF2Q9HAW0 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 SNORA5.1-201ENST00000384275 131 ntBASIC5.22□□□□□ -1.57
BRF2Q9HAW0 RNA5SP122-201ENST00000384457 108 ntBASIC5.22□□□□□ -1.57
BRF2Q9HAW0 DBIP1-201ENST00000401435 260 ntBASIC5.22□□□□□ -1.57
BRF2Q9HAW0 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 SDHDP6-201ENST00000414693 480 ntBASIC5.22□□□□□ -1.57
BRF2Q9HAW0 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 AC079809.1-201ENST00000415468 276 ntBASIC5.22□□□□□ -1.57
BRF2Q9HAW0 LINC01881-201ENST00000416103 412 ntBASIC5.22□□□□□ -1.57
BRF2Q9HAW0 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 VTI1BP4-201ENST00000427516 527 ntBASIC5.22□□□□□ -1.57
BRF2Q9HAW0 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 FMO7P-201ENST00000436045 768 ntBASIC5.22□□□□□ -1.57
BRF2Q9HAW0 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 EEF1B2P6-201ENST00000445713 673 ntBASIC5.22□□□□□ -1.57
BRF2Q9HAW0 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 AC084754.1-201ENST00000463466 464 ntBASIC5.22□□□□□ -1.57
BRF2Q9HAW0 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 CDC42P3-201ENST00000518493 633 ntBASIC5.22□□□□□ -1.57
BRF2Q9HAW0 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 AP000916.1-201ENST00000533869 835 ntBASIC5.22□□□□□ -1.57
BRF2Q9HAW0 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 AL049830.4-201ENST00000555149 351 ntBASIC5.22□□□□□ -1.57
BRF2Q9HAW0 AP005403.1-201ENST00000579720 229 ntBASIC5.22□□□□□ -1.57
BRF2Q9HAW0 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 RN7SL356P-201ENST00000582228 248 ntBASIC5.22□□□□□ -1.57
BRF2Q9HAW0 AC027243.2-201ENST00000602530 724 ntBASIC5.22□□□□□ -1.57
BRF2Q9HAW0 AP003117.1-201ENST00000602771 554 ntBASIC5.22□□□□□ -1.57
BRF2Q9HAW0 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 AL118522.2-201ENST00000616045 615 ntBASIC5.22□□□□□ -1.57
BRF2Q9HAW0 AC139769.3-201ENST00000618383 175 ntBASIC5.22□□□□□ -1.57
BRF2Q9HAW0 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 AC009313.2-201ENST00000417893 1941 ntBASIC5.22□□□□□ -1.57
BRF2Q9HAW0 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
BRF2Q9HAW0 STX3-208ENST00000641815 3236 ntBASIC5.21□□□□□ -1.57
BRF2Q9HAW0 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
BRF2Q9HAW0 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 RNU6-481P-201ENST00000384194 107 ntBASIC5.21□□□□□ -1.58
BRF2Q9HAW0 RNA5SP284-201ENST00000384547 118 ntBASIC5.21□□□□□ -1.58
BRF2Q9HAW0 RNA5SP241-201ENST00000391326 114 ntBASIC5.21□□□□□ -1.58
BRF2Q9HAW0 EI24P3-201ENST00000399046 1062 ntBASIC5.21□□□□□ -1.58
BRF2Q9HAW0 RPS3P2-201ENST00000421346 701 ntBASIC5.21□□□□□ -1.58
BRF2Q9HAW0 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 HSPD1P12-201ENST00000429127 1069 ntBASIC5.21□□□□□ -1.58
BRF2Q9HAW0 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 AC011242.1-201ENST00000433596 1158 ntBASIC5.21□□□□□ -1.58
BRF2Q9HAW0 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 AC006994.1-201ENST00000438212 839 ntBASIC5.21□□□□□ -1.58
BRF2Q9HAW0 AC002504.1-201ENST00000438281 691 ntBASIC5.21□□□□□ -1.58
BRF2Q9HAW0 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms