Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.93□□□□□ -1.46
UPF2Q9HAU5 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
UPF2Q9HAU5 AC095055.1-201ENST00000603472 1113 ntBASIC5.93□□□□□ -1.46
UPF2Q9HAU5 AC105254.2-201ENST00000603636 436 ntBASIC5.93□□□□□ -1.46
UPF2Q9HAU5 AC005377.1-201ENST00000605126 456 ntBASIC5.93□□□□□ -1.46
UPF2Q9HAU5 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.93□□□□□ -1.46
UPF2Q9HAU5 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
UPF2Q9HAU5 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
UPF2Q9HAU5 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
UPF2Q9HAU5 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
UPF2Q9HAU5 CASC19-281ENST00000642118 1554 ntBASIC5.93□□□□□ -1.46
UPF2Q9HAU5 AC008758.3-201ENST00000507003 1829 ntBASIC5.92□□□□□ -1.46
UPF2Q9HAU5 AC011493.1-201ENST00000596753 1632 ntBASIC5.92□□□□□ -1.46
UPF2Q9HAU5 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
UPF2Q9HAU5 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.92□□□□□ -1.46
UPF2Q9HAU5 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
UPF2Q9HAU5 SNORD96B-201ENST00000386148 79 ntBASIC5.92□□□□□ -1.46
UPF2Q9HAU5 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.92□□□□□ -1.46
UPF2Q9HAU5 SEPT7P8-201ENST00000413308 775 ntBASIC5.92□□□□□ -1.46
UPF2Q9HAU5 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.92□□□□□ -1.46
UPF2Q9HAU5 AC009237.10-201ENST00000414112 510 ntBASIC5.92□□□□□ -1.46
UPF2Q9HAU5 VN1R37P-201ENST00000419096 748 ntBASIC5.92□□□□□ -1.46
UPF2Q9HAU5 DDX39BP1-205ENST00000422507 192 ntBASIC5.92□□□□□ -1.46
UPF2Q9HAU5 FTLP19-201ENST00000433300 394 ntBASIC5.92□□□□□ -1.46
UPF2Q9HAU5 PPIAP13-201ENST00000434706 478 ntBASIC5.92□□□□□ -1.46
UPF2Q9HAU5 AL451139.1-201ENST00000434718 346 ntBASIC5.92□□□□□ -1.46
UPF2Q9HAU5 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.92□□□□□ -1.46
UPF2Q9HAU5 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.92□□□□□ -1.46
UPF2Q9HAU5 RPL31P15-201ENST00000449770 338 ntBASIC5.92□□□□□ -1.46
UPF2Q9HAU5 RPL23AP37-201ENST00000479658 549 ntBASIC5.92□□□□□ -1.46
UPF2Q9HAU5 ARL4AP1-201ENST00000503220 705 ntBASIC5.92□□□□□ -1.46
UPF2Q9HAU5 GOLGA5P1-201ENST00000507317 980 ntBASIC5.92□□□□□ -1.46
UPF2Q9HAU5 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
UPF2Q9HAU5 RNU6-1334P-201ENST00000516032 105 ntBASIC5.92□□□□□ -1.46
UPF2Q9HAU5 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.92□□□□□ -1.46
UPF2Q9HAU5 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
UPF2Q9HAU5 ATP5J2P6-201ENST00000565203 266 ntBASIC5.92□□□□□ -1.46
UPF2Q9HAU5 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.92□□□□□ -1.46
UPF2Q9HAU5 AC015849.6-201ENST00000605454 474 ntBASIC5.92□□□□□ -1.46
UPF2Q9HAU5 RNA5SP440-201ENST00000612665 119 ntBASIC5.92□□□□□ -1.46
UPF2Q9HAU5 NF1P10-201ENST00000613227 742 ntBASIC5.92□□□□□ -1.46
UPF2Q9HAU5 AL122125.1-201ENST00000616999 600 ntBASIC5.92□□□□□ -1.46
UPF2Q9HAU5 AC140113.4-201ENST00000622087 222 ntBASIC5.92□□□□□ -1.46
UPF2Q9HAU5 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.92□□□□□ -1.46
UPF2Q9HAU5 AP001273.1-201ENST00000624493 3152 ntBASIC5.92□□□□□ -1.46
UPF2Q9HAU5 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
UPF2Q9HAU5 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
UPF2Q9HAU5 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
UPF2Q9HAU5 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
UPF2Q9HAU5 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.91□□□□□ -1.46
UPF2Q9HAU5 IL6STP1-201ENST00000346911 1020 ntBASIC5.91□□□□□ -1.46
UPF2Q9HAU5 VDAC1P9-201ENST00000412766 841 ntBASIC5.91□□□□□ -1.46
UPF2Q9HAU5 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.91□□□□□ -1.46
UPF2Q9HAU5 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.91□□□□□ -1.46
UPF2Q9HAU5 AC002069.1-201ENST00000429649 1159 ntBASIC5.91□□□□□ -1.46
UPF2Q9HAU5 RPL7L1P9-201ENST00000431298 745 ntBASIC5.91□□□□□ -1.46
UPF2Q9HAU5 NFYAP1-201ENST00000431953 972 ntBASIC5.91□□□□□ -1.46
UPF2Q9HAU5 TDGF1P1-201ENST00000445734 527 ntBASIC5.91□□□□□ -1.46
UPF2Q9HAU5 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.91□□□□□ -1.46
UPF2Q9HAU5 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
UPF2Q9HAU5 AC104651.2-201ENST00000447549 528 ntBASIC5.91□□□□□ -1.46
UPF2Q9HAU5 AC007386.1-201ENST00000455212 582 ntBASIC5.91□□□□□ -1.46
UPF2Q9HAU5 HMGB1P19-201ENST00000517578 577 ntBASIC5.91□□□□□ -1.46
UPF2Q9HAU5 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.91□□□□□ -1.46
UPF2Q9HAU5 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.91□□□□□ -1.46
UPF2Q9HAU5 AL049779.2-201ENST00000553847 315 ntBASIC5.91□□□□□ -1.46
UPF2Q9HAU5 RN7SL52P-201ENST00000584271 284 ntBASIC5.91□□□□□ -1.46
UPF2Q9HAU5 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.91□□□□□ -1.46
UPF2Q9HAU5 AC127024.6-201ENST00000621598 424 ntBASIC5.91□□□□□ -1.46
UPF2Q9HAU5 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.91□□□□□ -1.46
UPF2Q9HAU5 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
UPF2Q9HAU5 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.91□□□□□ -1.46
UPF2Q9HAU5 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.91□□□□□ -1.46
UPF2Q9HAU5 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
UPF2Q9HAU5 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.91□□□□□ -1.46
UPF2Q9HAU5 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.91□□□□□ -1.46
UPF2Q9HAU5 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
UPF2Q9HAU5 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.91□□□□□ -1.46
UPF2Q9HAU5 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
UPF2Q9HAU5 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
UPF2Q9HAU5 RBPJP2-201ENST00000618187 1444 ntBASIC5.91□□□□□ -1.46
UPF2Q9HAU5 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
UPF2Q9HAU5 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
UPF2Q9HAU5 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
UPF2Q9HAU5 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
UPF2Q9HAU5 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.9□□□□□ -1.46
UPF2Q9HAU5 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
UPF2Q9HAU5 UGT2B26P-201ENST00000508672 1613 ntBASIC5.9□□□□□ -1.46
UPF2Q9HAU5 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
UPF2Q9HAU5 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
UPF2Q9HAU5 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
UPF2Q9HAU5 AC002524.1-201ENST00000411687 547 ntBASIC5.9□□□□□ -1.46
UPF2Q9HAU5 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.9□□□□□ -1.46
UPF2Q9HAU5 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.9□□□□□ -1.46
UPF2Q9HAU5 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC5.9□□□□□ -1.46
UPF2Q9HAU5 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
UPF2Q9HAU5 RPS27AP2-201ENST00000457576 465 ntBASIC5.9□□□□□ -1.46
UPF2Q9HAU5 RPL7P39-201ENST00000481157 744 ntBASIC5.9□□□□□ -1.46
UPF2Q9HAU5 AC021146.3-201ENST00000511911 260 ntBASIC5.9□□□□□ -1.46
UPF2Q9HAU5 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms