Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC079075.1-201ENST00000559543 878 ntBASIC5.29□□□□□ -1.56
NXF3Q9H4D5 AC010424.2-201ENST00000607594 443 ntBASIC5.29□□□□□ -1.56
NXF3Q9H4D5 RNU6-84P-201ENST00000607737 102 ntBASIC5.29□□□□□ -1.56
NXF3Q9H4D5 MIR6780A-201ENST00000615089 68 ntBASIC5.29□□□□□ -1.56
NXF3Q9H4D5 AP000346.3-201ENST00000622821 210 ntBASIC5.29□□□□□ -1.56
NXF3Q9H4D5 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
NXF3Q9H4D5 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NXF3Q9H4D5 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.29□□□□□ -1.56
NXF3Q9H4D5 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.29□□□□□ -1.56
NXF3Q9H4D5 AC008758.3-201ENST00000507003 1829 ntBASIC5.29□□□□□ -1.56
NXF3Q9H4D5 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
NXF3Q9H4D5 DDX18P6-201ENST00000450119 1997 ntBASIC5.29□□□□□ -1.56
NXF3Q9H4D5 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NXF3Q9H4D5 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
NXF3Q9H4D5 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.29□□□□□ -1.56
NXF3Q9H4D5 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NXF3Q9H4D5 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NXF3Q9H4D5 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
NXF3Q9H4D5 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
NXF3Q9H4D5 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NXF3Q9H4D5 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
NXF3Q9H4D5 AL031595.2-201ENST00000624215 19071 ntBASIC5.28□□□□□ -1.56
NXF3Q9H4D5 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NXF3Q9H4D5 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NXF3Q9H4D5 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NXF3Q9H4D5 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NXF3Q9H4D5 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NXF3Q9H4D5 RPL21P67-201ENST00000402896 478 ntBASIC5.28□□□□□ -1.56
NXF3Q9H4D5 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.28□□□□□ -1.56
NXF3Q9H4D5 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.28□□□□□ -1.56
NXF3Q9H4D5 PCNPP4-201ENST00000414817 517 ntBASIC5.28□□□□□ -1.56
NXF3Q9H4D5 RANP7-201ENST00000418085 644 ntBASIC5.28□□□□□ -1.56
NXF3Q9H4D5 QRSL1P2-201ENST00000418582 964 ntBASIC5.28□□□□□ -1.56
NXF3Q9H4D5 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.28□□□□□ -1.56
NXF3Q9H4D5 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.28□□□□□ -1.56
NXF3Q9H4D5 NRBF2P3-201ENST00000432731 865 ntBASIC5.28□□□□□ -1.56
NXF3Q9H4D5 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.28□□□□□ -1.56
NXF3Q9H4D5 AC005154.2-201ENST00000438110 379 ntBASIC5.28□□□□□ -1.56
NXF3Q9H4D5 AL138878.2-201ENST00000440581 1241 ntBASIC5.28□□□□□ -1.56
NXF3Q9H4D5 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.28□□□□□ -1.56
NXF3Q9H4D5 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.28□□□□□ -1.56
NXF3Q9H4D5 AL513533.1-201ENST00000453728 415 ntBASIC5.28□□□□□ -1.56
NXF3Q9H4D5 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.28□□□□□ -1.56
NXF3Q9H4D5 GYG1P1-201ENST00000460864 698 ntBASIC5.28□□□□□ -1.56
NXF3Q9H4D5 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.28□□□□□ -1.56
NXF3Q9H4D5 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.28□□□□□ -1.56
NXF3Q9H4D5 AC138409.2-202ENST00000507274 458 ntBASIC5.28□□□□□ -1.56
NXF3Q9H4D5 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.28□□□□□ -1.56
NXF3Q9H4D5 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.28□□□□□ -1.56
NXF3Q9H4D5 SOX5P1-201ENST00000524155 1127 ntBASIC5.28□□□□□ -1.56
NXF3Q9H4D5 OR5AN2P-201ENST00000534535 896 ntBASIC5.28□□□□□ -1.56
NXF3Q9H4D5 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
NXF3Q9H4D5 AC007066.2-202ENST00000566531 914 ntBASIC5.28□□□□□ -1.56
NXF3Q9H4D5 AC090286.3-201ENST00000573133 187 ntBASIC5.28□□□□□ -1.56
NXF3Q9H4D5 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.28□□□□□ -1.56
NXF3Q9H4D5 AC234771.5-201ENST00000600161 514 ntBASIC5.28□□□□□ -1.56
NXF3Q9H4D5 AC068790.7-201ENST00000602347 528 ntBASIC5.28□□□□□ -1.56
NXF3Q9H4D5 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.28□□□□□ -1.56
NXF3Q9H4D5 AC239803.2-201ENST00000610161 430 ntBASIC5.28□□□□□ -1.56
NXF3Q9H4D5 FAM27B-201ENST00000610601 213 ntBASIC5.28□□□□□ -1.56
NXF3Q9H4D5 AC010809.3-201ENST00000621310 641 ntBASIC5.28□□□□□ -1.56
NXF3Q9H4D5 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
NXF3Q9H4D5 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NXF3Q9H4D5 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NXF3Q9H4D5 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.28□□□□□ -1.56
NXF3Q9H4D5 AC011447.7-201ENST00000624228 1590 ntBASIC5.28□□□□□ -1.56
NXF3Q9H4D5 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.28□□□□□ -1.56
NXF3Q9H4D5 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.28□□□□□ -1.56
NXF3Q9H4D5 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NXF3Q9H4D5 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NXF3Q9H4D5 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.27□□□□□ -1.57
NXF3Q9H4D5 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
NXF3Q9H4D5 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NXF3Q9H4D5 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.27□□□□□ -1.57
NXF3Q9H4D5 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.27□□□□□ -1.57
NXF3Q9H4D5 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
NXF3Q9H4D5 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
NXF3Q9H4D5 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
NXF3Q9H4D5 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.27□□□□□ -1.57
NXF3Q9H4D5 AC079741.1-201ENST00000321498 212 ntBASIC5.27□□□□□ -1.57
NXF3Q9H4D5 AC013442.1-201ENST00000397347 228 ntBASIC5.27□□□□□ -1.57
NXF3Q9H4D5 RNU2-50P-201ENST00000410494 143 ntBASIC5.27□□□□□ -1.57
NXF3Q9H4D5 AC114755.2-201ENST00000413520 361 ntBASIC5.27□□□□□ -1.57
NXF3Q9H4D5 BX510359.2-201ENST00000417920 305 ntBASIC5.27□□□□□ -1.57
NXF3Q9H4D5 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.27□□□□□ -1.57
NXF3Q9H4D5 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.27□□□□□ -1.57
NXF3Q9H4D5 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.27□□□□□ -1.57
NXF3Q9H4D5 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.27□□□□□ -1.57
NXF3Q9H4D5 RN7SL459P-201ENST00000481078 302 ntBASIC5.27□□□□□ -1.57
NXF3Q9H4D5 RPL23AP72-201ENST00000492447 435 ntBASIC5.27□□□□□ -1.57
NXF3Q9H4D5 SCARNA22-201ENST00000503991 125 ntBASIC5.27□□□□□ -1.57
NXF3Q9H4D5 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.27□□□□□ -1.57
NXF3Q9H4D5 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.27□□□□□ -1.57
NXF3Q9H4D5 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.27□□□□□ -1.57
NXF3Q9H4D5 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.27□□□□□ -1.57
NXF3Q9H4D5 HIGD1AP5-201ENST00000529959 259 ntBASIC5.27□□□□□ -1.57
NXF3Q9H4D5 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.27□□□□□ -1.57
NXF3Q9H4D5 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.27□□□□□ -1.57
NXF3Q9H4D5 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.27□□□□□ -1.57
NXF3Q9H4D5 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 224 ms