Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 CBX1P3-201ENST00000413296 527 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AL449283.1-202ENST00000418249 604 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 KRR1P1-201ENST00000419430 803 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AL365338.1-201ENST00000422282 858 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AC113412.1-201ENST00000425840 504 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AL662874.1-201ENST00000426065 230 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AL136231.1-201ENST00000429407 730 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 RPL7AP49-201ENST00000429522 581 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AL591438.1-201ENST00000433508 581 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 DNAJA1P5-201ENST00000440278 943 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AC005297.1-201ENST00000444765 862 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AL096803.2-201ENST00000450032 677 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 CBX1P2-201ENST00000453841 458 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AL122001.1-201ENST00000457027 370 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 RPL6P9-201ENST00000466502 859 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AC011476.1-201ENST00000466725 307 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 PSMA2P2-201ENST00000504319 686 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AC109464.1-201ENST00000511091 819 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 CDC42P3-201ENST00000518493 633 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AC009097.3-201ENST00000563557 1018 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AC019322.1-201ENST00000571869 389 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AC067773.1-201ENST00000603284 1094 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AC013444.2-201ENST00000603317 787 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AL022394.1-201ENST00000606979 292 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AC018690.1-201ENST00000608144 626 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AC092954.1-201ENST00000609121 445 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AC244107.2-201ENST00000611773 76 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 uc_338.7-201ENST00000621834 124 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AC112694.2-201ENST00000623697 768 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AC026422.1-201ENST00000623961 452 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AC099654.6-201ENST00000636487 512 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AP000473.2-201ENST00000602659 1537 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AC007342.7-201ENST00000624610 2337 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 BX284613.1-201ENST00000452221 1641 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AL450345.1-202ENST00000605741 3881 ntBASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 AC119751.3-201ENST00000399720 670 ntBASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 AL049545.1-201ENST00000401856 572 ntBASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 AC115283.1-201ENST00000427353 400 ntBASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 RPL19P16-201ENST00000433839 588 ntBASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 AL450023.1-201ENST00000450868 751 ntBASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 AL035090.1-201ENST00000454835 332 ntBASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 NAP1L1P3-201ENST00000462291 880 ntBASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 RN7SL168P-201ENST00000463821 279 ntBASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 AC004263.1-201ENST00000479327 332 ntBASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 AP000563.1-201ENST00000490865 758 ntBASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 GOLGA5P1-201ENST00000507317 980 ntBASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 NPM1P21-201ENST00000513394 762 ntBASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 RNU6-1028P-201ENST00000517164 93 ntBASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 SNORA43.3-201ENST00000517240 103 ntBASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms