Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 OR6D1P-201ENST00000436165 939 ntBASIC5.26□□□□□ -1.57
RAE1P78406 SUMO2P3-201ENST00000438311 288 ntBASIC5.26□□□□□ -1.57
RAE1P78406 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.26□□□□□ -1.57
RAE1P78406 AL450023.1-201ENST00000450868 751 ntBASIC5.26□□□□□ -1.57
RAE1P78406 AL445665.1-202ENST00000452436 324 ntBASIC5.26□□□□□ -1.57
RAE1P78406 VDAC2P4-201ENST00000452925 711 ntBASIC5.26□□□□□ -1.57
RAE1P78406 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.26□□□□□ -1.57
RAE1P78406 AC004263.1-201ENST00000479327 332 ntBASIC5.26□□□□□ -1.57
RAE1P78406 RNU6-1004P-201ENST00000516584 111 ntBASIC5.26□□□□□ -1.57
RAE1P78406 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.26□□□□□ -1.57
RAE1P78406 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.26□□□□□ -1.57
RAE1P78406 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.26□□□□□ -1.57
RAE1P78406 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RAE1P78406 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RAE1P78406 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.26□□□□□ -1.57
RAE1P78406 AC023824.3-201ENST00000569003 562 ntBASIC5.26□□□□□ -1.57
RAE1P78406 RBM22P1-201ENST00000578589 1214 ntBASIC5.26□□□□□ -1.57
RAE1P78406 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.26□□□□□ -1.57
RAE1P78406 AC079315.1-201ENST00000602952 623 ntBASIC5.26□□□□□ -1.57
RAE1P78406 AL035411.2-201ENST00000604022 421 ntBASIC5.26□□□□□ -1.57
RAE1P78406 AC005377.1-201ENST00000605126 456 ntBASIC5.26□□□□□ -1.57
RAE1P78406 AL365181.4-201ENST00000609800 547 ntBASIC5.26□□□□□ -1.57
RAE1P78406 AL096712.1-201ENST00000614561 159 ntBASIC5.26□□□□□ -1.57
RAE1P78406 AL121895.2-201ENST00000619558 447 ntBASIC5.26□□□□□ -1.57
RAE1P78406 MIR193BHG-214ENST00000641765 509 ntBASIC5.26□□□□□ -1.57
RAE1P78406 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RAE1P78406 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
RAE1P78406 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.26□□□□□ -1.57
RAE1P78406 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RAE1P78406 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RAE1P78406 MTND4P8-201ENST00000514997 1362 ntBASIC5.26□□□□□ -1.57
RAE1P78406 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RAE1P78406 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RAE1P78406 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
RAE1P78406 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
RAE1P78406 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RAE1P78406 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RAE1P78406 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
RAE1P78406 LINC02019-201ENST00000608605 2060 ntBASIC5.25□□□□□ -1.57
RAE1P78406 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RAE1P78406 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RAE1P78406 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
RAE1P78406 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.25□□□□□ -1.57
RAE1P78406 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RAE1P78406 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RAE1P78406 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RAE1P78406 METTL21EP-201ENST00000298105 713 ntBASIC5.25□□□□□ -1.57
RAE1P78406 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RAE1P78406 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
RAE1P78406 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RAE1P78406 RPL23AP59-201ENST00000399415 461 ntBASIC5.25□□□□□ -1.57
RAE1P78406 AL049545.1-201ENST00000401856 572 ntBASIC5.25□□□□□ -1.57
RAE1P78406 HMGN1P20-201ENST00000411849 300 ntBASIC5.25□□□□□ -1.57
RAE1P78406 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.25□□□□□ -1.57
RAE1P78406 RPS3AP37-201ENST00000419176 745 ntBASIC5.25□□□□□ -1.57
RAE1P78406 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.25□□□□□ -1.57
RAE1P78406 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.25□□□□□ -1.57
RAE1P78406 HMGB3P10-201ENST00000434734 572 ntBASIC5.25□□□□□ -1.57
RAE1P78406 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.25□□□□□ -1.57
RAE1P78406 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.25□□□□□ -1.57
RAE1P78406 AC073052.1-201ENST00000440417 714 ntBASIC5.25□□□□□ -1.57
RAE1P78406 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.25□□□□□ -1.57
RAE1P78406 Z83846.1-201ENST00000446798 265 ntBASIC5.25□□□□□ -1.57
RAE1P78406 AL358876.1-201ENST00000453364 1075 ntBASIC5.25□□□□□ -1.57
RAE1P78406 NDUFA5P5-201ENST00000468361 342 ntBASIC5.25□□□□□ -1.57
RAE1P78406 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RAE1P78406 PFN1P8-201ENST00000497012 543 ntBASIC5.25□□□□□ -1.57
RAE1P78406 AC023050.1-201ENST00000498198 304 ntBASIC5.25□□□□□ -1.57
RAE1P78406 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC5.25□□□□□ -1.57
RAE1P78406 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.25□□□□□ -1.57
RAE1P78406 AC138866.2-201ENST00000508650 584 ntBASIC5.25□□□□□ -1.57
RAE1P78406 AC074087.1-201ENST00000512059 724 ntBASIC5.25□□□□□ -1.57
RAE1P78406 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.25□□□□□ -1.57
RAE1P78406 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.25□□□□□ -1.57
RAE1P78406 MTND4P33-201ENST00000556706 766 ntBASIC5.25□□□□□ -1.57
RAE1P78406 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.25□□□□□ -1.57
RAE1P78406 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.25□□□□□ -1.57
RAE1P78406 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.25□□□□□ -1.57
RAE1P78406 AP000769.2-201ENST00000602344 396 ntBASIC5.25□□□□□ -1.57
RAE1P78406 AL583832.1-201ENST00000603227 784 ntBASIC5.25□□□□□ -1.57
RAE1P78406 AC025588.2-201ENST00000604851 466 ntBASIC5.25□□□□□ -1.57
RAE1P78406 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.25□□□□□ -1.57
RAE1P78406 AC092954.1-201ENST00000609121 445 ntBASIC5.25□□□□□ -1.57
RAE1P78406 AC096586.1-201ENST00000610267 561 ntBASIC5.25□□□□□ -1.57
RAE1P78406 OR8G7P-201ENST00000616658 848 ntBASIC5.25□□□□□ -1.57
RAE1P78406 AC138907.10-201ENST00000623708 983 ntBASIC5.25□□□□□ -1.57
RAE1P78406 AC135068.5-201ENST00000624197 983 ntBASIC5.25□□□□□ -1.57
RAE1P78406 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RAE1P78406 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RAE1P78406 YES1P1-201ENST00000418510 1628 ntBASIC5.25□□□□□ -1.57
RAE1P78406 UGT2B26P-201ENST00000508672 1613 ntBASIC5.25□□□□□ -1.57
RAE1P78406 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.25□□□□□ -1.57
RAE1P78406 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RAE1P78406 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RAE1P78406 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
RAE1P78406 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
RAE1P78406 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RAE1P78406 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RAE1P78406 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RAE1P78406 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms