Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.3□□□□□ -1.72
LMO4P61968 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LMO4P61968 MTCO1P7-201ENST00000419523 1542 ntBASIC4.3□□□□□ -1.72
LMO4P61968 MTCO1P15-201ENST00000529569 1526 ntBASIC4.3□□□□□ -1.72
LMO4P61968 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LMO4P61968 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LMO4P61968 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
LMO4P61968 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
LMO4P61968 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LMO4P61968 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.29□□□□□ -1.72
LMO4P61968 AL355488.2-201ENST00000609909 2850 ntBASIC4.29□□□□□ -1.72
LMO4P61968 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
LMO4P61968 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LMO4P61968 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LMO4P61968 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LMO4P61968 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.29□□□□□ -1.72
LMO4P61968 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
LMO4P61968 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
LMO4P61968 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
LMO4P61968 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
LMO4P61968 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
LMO4P61968 SNORA63.3-201ENST00000362682 132 ntBASIC4.29□□□□□ -1.72
LMO4P61968 RNU6-1251P-201ENST00000364502 107 ntBASIC4.29□□□□□ -1.72
LMO4P61968 RN7SKP153-201ENST00000365026 316 ntBASIC4.29□□□□□ -1.72
LMO4P61968 RNA5SP455-201ENST00000365190 119 ntBASIC4.29□□□□□ -1.72
LMO4P61968 RNU1-74P-201ENST00000384108 171 ntBASIC4.29□□□□□ -1.72
LMO4P61968 RNU6-729P-201ENST00000384399 107 ntBASIC4.29□□□□□ -1.72
LMO4P61968 AF228730.1-201ENST00000397972 663 ntBASIC4.29□□□□□ -1.72
LMO4P61968 RPL10P10-201ENST00000403509 664 ntBASIC4.29□□□□□ -1.72
LMO4P61968 AL589655.1-201ENST00000405398 482 ntBASIC4.29□□□□□ -1.72
LMO4P61968 AL353692.2-201ENST00000407054 335 ntBASIC4.29□□□□□ -1.72
LMO4P61968 RN7SKP114-201ENST00000410327 279 ntBASIC4.29□□□□□ -1.72
LMO4P61968 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.29□□□□□ -1.72
LMO4P61968 SSR1P2-201ENST00000415208 787 ntBASIC4.29□□□□□ -1.72
LMO4P61968 AC021876.1-201ENST00000425959 359 ntBASIC4.29□□□□□ -1.72
LMO4P61968 AC092447.3-201ENST00000426027 686 ntBASIC4.29□□□□□ -1.72
LMO4P61968 AC073508.1-201ENST00000428866 656 ntBASIC4.29□□□□□ -1.72
LMO4P61968 MTCO1P45-201ENST00000431457 267 ntBASIC4.29□□□□□ -1.72
LMO4P61968 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LMO4P61968 HMGB3P10-201ENST00000434734 572 ntBASIC4.29□□□□□ -1.72
LMO4P61968 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.29□□□□□ -1.72
LMO4P61968 AC006466.1-201ENST00000438721 289 ntBASIC4.29□□□□□ -1.72
LMO4P61968 TXNP2-201ENST00000443918 295 ntBASIC4.29□□□□□ -1.72
LMO4P61968 MTATP6P26-201ENST00000445926 662 ntBASIC4.29□□□□□ -1.72
LMO4P61968 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.29□□□□□ -1.72
LMO4P61968 NOP56P2-201ENST00000447491 769 ntBASIC4.29□□□□□ -1.72
LMO4P61968 CCRL1P1-201ENST00000449542 1053 ntBASIC4.29□□□□□ -1.72
LMO4P61968 snoU13.20-201ENST00000459180 104 ntBASIC4.29□□□□□ -1.72
LMO4P61968 AC108751.3-201ENST00000461814 1020 ntBASIC4.29□□□□□ -1.72
LMO4P61968 RPS3AP41-201ENST00000462701 778 ntBASIC4.29□□□□□ -1.72
LMO4P61968 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.29□□□□□ -1.72
LMO4P61968 RPL7P41-201ENST00000485823 957 ntBASIC4.29□□□□□ -1.72
LMO4P61968 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.29□□□□□ -1.72
LMO4P61968 RPS24P16-201ENST00000497294 392 ntBASIC4.29□□□□□ -1.72
LMO4P61968 AC105233.1-201ENST00000498840 781 ntBASIC4.29□□□□□ -1.72
LMO4P61968 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.29□□□□□ -1.72
LMO4P61968 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.29□□□□□ -1.72
LMO4P61968 AC002456.2-201ENST00000509356 380 ntBASIC4.29□□□□□ -1.72
LMO4P61968 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.29□□□□□ -1.72
LMO4P61968 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.29□□□□□ -1.72
LMO4P61968 MTND2P38-201ENST00000522536 667 ntBASIC4.29□□□□□ -1.72
LMO4P61968 CIR1P1-201ENST00000524055 1133 ntBASIC4.29□□□□□ -1.72
LMO4P61968 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.29□□□□□ -1.72
LMO4P61968 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.29□□□□□ -1.72
LMO4P61968 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LMO4P61968 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.29□□□□□ -1.72
LMO4P61968 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LMO4P61968 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.29□□□□□ -1.72
LMO4P61968 MIR4480-201ENST00000582492 71 ntBASIC4.29□□□□□ -1.72
LMO4P61968 MIR4691-201ENST00000583764 85 ntBASIC4.29□□□□□ -1.72
LMO4P61968 BNIP3P38-201ENST00000601117 544 ntBASIC4.29□□□□□ -1.72
LMO4P61968 AC005084.1-201ENST00000605160 304 ntBASIC4.29□□□□□ -1.72
LMO4P61968 HMGB1P51-201ENST00000605166 638 ntBASIC4.29□□□□□ -1.72
LMO4P61968 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.29□□□□□ -1.72
LMO4P61968 AL627230.1-201ENST00000613077 211 ntBASIC4.29□□□□□ -1.72
LMO4P61968 AL591926.8-201ENST00000616876 211 ntBASIC4.29□□□□□ -1.72
LMO4P61968 AC073869.7-201ENST00000640874 297 ntBASIC4.29□□□□□ -1.72
LMO4P61968 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LMO4P61968 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.29□□□□□ -1.72
LMO4P61968 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LMO4P61968 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
LMO4P61968 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.29□□□□□ -1.72
LMO4P61968 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.29□□□□□ -1.72
LMO4P61968 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
LMO4P61968 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
LMO4P61968 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LMO4P61968 AC020633.1-201ENST00000468439 2247 ntBASIC4.29□□□□□ -1.72
LMO4P61968 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
LMO4P61968 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.28□□□□□ -1.72
LMO4P61968 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LMO4P61968 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.28□□□□□ -1.72
LMO4P61968 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC4.28□□□□□ -1.72
LMO4P61968 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LMO4P61968 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.28□□□□□ -1.72
LMO4P61968 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LMO4P61968 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.28□□□□□ -1.72
LMO4P61968 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.28□□□□□ -1.72
LMO4P61968 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
LMO4P61968 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
LMO4P61968 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms