Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LIMK1P53667 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
LIMK1P53667 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.55
LIMK1P53667 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
LIMK1P53667 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.36□□□□□ -1.55
LIMK1P53667 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
LIMK1P53667 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
LIMK1P53667 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LIMK1P53667 AP001029.2-203ENST00000589795 4910 ntBASIC5.36□□□□□ -1.55
LIMK1P53667 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.36□□□□□ -1.55
LIMK1P53667 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LIMK1P53667 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LIMK1P53667 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
LIMK1P53667 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LIMK1P53667 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.36□□□□□ -1.55
LIMK1P53667 COX6B1P1-201ENST00000415962 213 ntBASIC5.36□□□□□ -1.55
LIMK1P53667 AL121878.1-201ENST00000418638 859 ntBASIC5.36□□□□□ -1.55
LIMK1P53667 MTCYBP7-201ENST00000419540 1134 ntBASIC5.36□□□□□ -1.55
LIMK1P53667 OR6K4P-201ENST00000423179 955 ntBASIC5.36□□□□□ -1.55
LIMK1P53667 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.36□□□□□ -1.55
LIMK1P53667 AC016712.1-201ENST00000431088 378 ntBASIC5.36□□□□□ -1.55
LIMK1P53667 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.36□□□□□ -1.55
LIMK1P53667 AL354710.1-201ENST00000453641 246 ntBASIC5.36□□□□□ -1.55
LIMK1P53667 AC004129.2-201ENST00000457229 287 ntBASIC5.36□□□□□ -1.55
LIMK1P53667 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.36□□□□□ -1.55
LIMK1P53667 AC092905.1-201ENST00000467527 949 ntBASIC5.36□□□□□ -1.55
LIMK1P53667 RPL7P16-201ENST00000479738 738 ntBASIC5.36□□□□□ -1.55
LIMK1P53667 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.36□□□□□ -1.55
LIMK1P53667 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.36□□□□□ -1.55
LIMK1P53667 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.36□□□□□ -1.55
LIMK1P53667 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.36□□□□□ -1.55
LIMK1P53667 AC111000.6-201ENST00000514471 709 ntBASIC5.36□□□□□ -1.55
LIMK1P53667 RNU6-491P-201ENST00000516099 110 ntBASIC5.36□□□□□ -1.55
LIMK1P53667 RN7SKP288-201ENST00000516227 268 ntBASIC5.36□□□□□ -1.55
LIMK1P53667 AC067904.2-201ENST00000517322 1283 ntBASIC5.36□□□□□ -1.55
LIMK1P53667 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.36□□□□□ -1.55
LIMK1P53667 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.36□□□□□ -1.55
LIMK1P53667 NMNAT1P5-201ENST00000559657 841 ntBASIC5.36□□□□□ -1.55
LIMK1P53667 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.36□□□□□ -1.55
LIMK1P53667 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.36□□□□□ -1.55
LIMK1P53667 AC027216.1-201ENST00000577726 685 ntBASIC5.36□□□□□ -1.55
LIMK1P53667 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.36□□□□□ -1.55
LIMK1P53667 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.36□□□□□ -1.55
LIMK1P53667 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
LIMK1P53667 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.36□□□□□ -1.55
LIMK1P53667 AC074276.2-201ENST00000619891 348 ntBASIC5.36□□□□□ -1.55
LIMK1P53667 AC015908.5-201ENST00000623289 343 ntBASIC5.36□□□□□ -1.55
LIMK1P53667 AC112694.2-201ENST00000623697 768 ntBASIC5.36□□□□□ -1.55
LIMK1P53667 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.36□□□□□ -1.55
LIMK1P53667 HPVC1-201ENST00000629899 1198 ntBASIC5.36□□□□□ -1.55
LIMK1P53667 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.36□□□□□ -1.55
LIMK1P53667 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.36□□□□□ -1.55
LIMK1P53667 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
LIMK1P53667 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LIMK1P53667 CASC19-221ENST00000641309 1382 ntBASIC5.36□□□□□ -1.55
LIMK1P53667 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
LIMK1P53667 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.36□□□□□ -1.55
LIMK1P53667 AC002525.1-201ENST00000624392 1622 ntBASIC5.36□□□□□ -1.55
LIMK1P53667 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LIMK1P53667 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.36□□□□□ -1.55
LIMK1P53667 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.36□□□□□ -1.55
LIMK1P53667 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
LIMK1P53667 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
LIMK1P53667 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.35□□□□□ -1.55
LIMK1P53667 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
LIMK1P53667 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.35□□□□□ -1.55
LIMK1P53667 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
LIMK1P53667 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LIMK1P53667 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LIMK1P53667 AC104118.1-201ENST00000607625 1589 ntBASIC5.35□□□□□ -1.55
LIMK1P53667 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
LIMK1P53667 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LIMK1P53667 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
LIMK1P53667 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LIMK1P53667 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
LIMK1P53667 RN7SKP149-201ENST00000363008 344 ntBASIC5.35□□□□□ -1.55
LIMK1P53667 RN7SKP113-201ENST00000363891 295 ntBASIC5.35□□□□□ -1.55
LIMK1P53667 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
LIMK1P53667 RN7SKP247-201ENST00000411094 308 ntBASIC5.35□□□□□ -1.55
LIMK1P53667 AC079809.1-201ENST00000415468 276 ntBASIC5.35□□□□□ -1.55
LIMK1P53667 AL133482.1-201ENST00000415988 498 ntBASIC5.35□□□□□ -1.55
LIMK1P53667 OR5M12P-201ENST00000423388 929 ntBASIC5.35□□□□□ -1.55
LIMK1P53667 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.35□□□□□ -1.55
LIMK1P53667 CR848007.2-201ENST00000424918 787 ntBASIC5.35□□□□□ -1.55
LIMK1P53667 RPL7P56-201ENST00000429441 717 ntBASIC5.35□□□□□ -1.55
LIMK1P53667 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.35□□□□□ -1.55
LIMK1P53667 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.35□□□□□ -1.55
LIMK1P53667 MTCYBP21-201ENST00000443300 1113 ntBASIC5.35□□□□□ -1.55
LIMK1P53667 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.35□□□□□ -1.55
LIMK1P53667 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
LIMK1P53667 TRY2P-201ENST00000448860 689 ntBASIC5.35□□□□□ -1.55
LIMK1P53667 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.35□□□□□ -1.55
LIMK1P53667 AC089999.1-201ENST00000460336 374 ntBASIC5.35□□□□□ -1.55
LIMK1P53667 RN7SL459P-201ENST00000481078 302 ntBASIC5.35□□□□□ -1.55
LIMK1P53667 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.35□□□□□ -1.55
LIMK1P53667 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.35□□□□□ -1.55
LIMK1P53667 HPRT1P1-201ENST00000509498 657 ntBASIC5.35□□□□□ -1.55
LIMK1P53667 RNA5SP230-201ENST00000517039 122 ntBASIC5.35□□□□□ -1.55
LIMK1P53667 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.35□□□□□ -1.55
LIMK1P53667 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 7.1 ms