Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHRNA3P32297 ZNF652P1-201ENST00000442420 1309 ntBASIC5.33□□□□□ -1.56
CHRNA3P32297 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CHRNA3P32297 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CHRNA3P32297 MIR600-201ENST00000385007 98 ntBASIC5.33□□□□□ -1.56
CHRNA3P32297 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CHRNA3P32297 AL078599.1-201ENST00000402075 293 ntBASIC5.33□□□□□ -1.56
CHRNA3P32297 AC007394.1-201ENST00000421941 531 ntBASIC5.33□□□□□ -1.56
CHRNA3P32297 RPL34P6-201ENST00000432390 345 ntBASIC5.33□□□□□ -1.56
CHRNA3P32297 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.33□□□□□ -1.56
CHRNA3P32297 AL392003.1-201ENST00000434394 243 ntBASIC5.33□□□□□ -1.56
CHRNA3P32297 AC004980.3-201ENST00000447046 365 ntBASIC5.33□□□□□ -1.56
CHRNA3P32297 AL356981.1-201ENST00000454879 684 ntBASIC5.33□□□□□ -1.56
CHRNA3P32297 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.33□□□□□ -1.56
CHRNA3P32297 TPT1P1-201ENST00000458495 518 ntBASIC5.33□□□□□ -1.56
CHRNA3P32297 HMGN1P8-201ENST00000463578 288 ntBASIC5.33□□□□□ -1.56
CHRNA3P32297 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.33□□□□□ -1.56
CHRNA3P32297 OR9N1P-201ENST00000491296 333 ntBASIC5.33□□□□□ -1.56
CHRNA3P32297 RN7SL441P-201ENST00000492388 296 ntBASIC5.33□□□□□ -1.56
CHRNA3P32297 RN7SL808P-201ENST00000496066 299 ntBASIC5.33□□□□□ -1.56
CHRNA3P32297 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.33□□□□□ -1.56
CHRNA3P32297 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHRNA3P32297 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.33□□□□□ -1.56
CHRNA3P32297 RNU6-319P-201ENST00000516025 108 ntBASIC5.33□□□□□ -1.56
CHRNA3P32297 AC012400.1-201ENST00000518452 381 ntBASIC5.33□□□□□ -1.56
CHRNA3P32297 OR4A46P-201ENST00000527255 933 ntBASIC5.33□□□□□ -1.56
CHRNA3P32297 AL049874.4-201ENST00000557593 255 ntBASIC5.33□□□□□ -1.56
CHRNA3P32297 NDUFB4P11-201ENST00000560510 395 ntBASIC5.33□□□□□ -1.56
CHRNA3P32297 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.33□□□□□ -1.56
CHRNA3P32297 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.33□□□□□ -1.56
CHRNA3P32297 MIR4675-201ENST00000577898 77 ntBASIC5.33□□□□□ -1.56
CHRNA3P32297 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.33□□□□□ -1.56
CHRNA3P32297 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.33□□□□□ -1.56
CHRNA3P32297 FAM60CP-201ENST00000591086 664 ntBASIC5.33□□□□□ -1.56
CHRNA3P32297 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.33□□□□□ -1.56
CHRNA3P32297 AC006116.3-201ENST00000592968 361 ntBASIC5.33□□□□□ -1.56
CHRNA3P32297 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.33□□□□□ -1.56
CHRNA3P32297 AL445222.1-201ENST00000607259 628 ntBASIC5.33□□□□□ -1.56
CHRNA3P32297 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.33□□□□□ -1.56
CHRNA3P32297 AC009163.6-201ENST00000612367 342 ntBASIC5.33□□□□□ -1.56
CHRNA3P32297 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
CHRNA3P32297 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.33□□□□□ -1.56
CHRNA3P32297 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CHRNA3P32297 TTC39DP-201ENST00000416781 1688 ntBASIC5.33□□□□□ -1.56
CHRNA3P32297 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.33□□□□□ -1.56
CHRNA3P32297 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHRNA3P32297 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CHRNA3P32297 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
CHRNA3P32297 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHRNA3P32297 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CHRNA3P32297 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.32□□□□□ -1.56
CHRNA3P32297 AL356317.1-201ENST00000396110 1436 ntBASIC5.32□□□□□ -1.56
CHRNA3P32297 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNA3P32297 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNA3P32297 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNA3P32297 AP001642.1-201ENST00000624727 2117 ntBASIC5.32□□□□□ -1.56
CHRNA3P32297 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.32□□□□□ -1.56
CHRNA3P32297 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
CHRNA3P32297 SNORA58B-201ENST00000364259 136 ntBASIC5.32□□□□□ -1.56
CHRNA3P32297 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNA3P32297 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.32□□□□□ -1.56
CHRNA3P32297 RNU1-106P-201ENST00000384382 164 ntBASIC5.32□□□□□ -1.56
CHRNA3P32297 AC104297.1-201ENST00000393779 870 ntBASIC5.32□□□□□ -1.56
CHRNA3P32297 AL645927.1-201ENST00000396783 406 ntBASIC5.32□□□□□ -1.56
CHRNA3P32297 AC013442.1-201ENST00000397347 228 ntBASIC5.32□□□□□ -1.56
CHRNA3P32297 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CHRNA3P32297 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.32□□□□□ -1.56
CHRNA3P32297 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.32□□□□□ -1.56
CHRNA3P32297 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.32□□□□□ -1.56
CHRNA3P32297 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.32□□□□□ -1.56
CHRNA3P32297 HSPE1P22-201ENST00000456856 327 ntBASIC5.32□□□□□ -1.56
CHRNA3P32297 RNA5SP103-201ENST00000459503 118 ntBASIC5.32□□□□□ -1.56
CHRNA3P32297 GYG1P1-201ENST00000460864 698 ntBASIC5.32□□□□□ -1.56
CHRNA3P32297 RN7SL610P-201ENST00000463845 291 ntBASIC5.32□□□□□ -1.56
CHRNA3P32297 AC004453.1-201ENST00000487895 408 ntBASIC5.32□□□□□ -1.56
CHRNA3P32297 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.32□□□□□ -1.56
CHRNA3P32297 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNA3P32297 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.32□□□□□ -1.56
CHRNA3P32297 AC008676.3-201ENST00000521237 435 ntBASIC5.32□□□□□ -1.56
CHRNA3P32297 EIF4A2P5-201ENST00000529914 499 ntBASIC5.32□□□□□ -1.56
CHRNA3P32297 AC134349.2-201ENST00000535136 910 ntBASIC5.32□□□□□ -1.56
CHRNA3P32297 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.32□□□□□ -1.56
CHRNA3P32297 AC068993.1-201ENST00000546724 589 ntBASIC5.32□□□□□ -1.56
CHRNA3P32297 AL512310.9-201ENST00000553311 948 ntBASIC5.32□□□□□ -1.56
CHRNA3P32297 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.32□□□□□ -1.56
CHRNA3P32297 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.32□□□□□ -1.56
CHRNA3P32297 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.32□□□□□ -1.56
CHRNA3P32297 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.32□□□□□ -1.56
CHRNA3P32297 AC119501.1-201ENST00000603646 475 ntBASIC5.32□□□□□ -1.56
CHRNA3P32297 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.32□□□□□ -1.56
CHRNA3P32297 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.32□□□□□ -1.56
CHRNA3P32297 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.32□□□□□ -1.56
CHRNA3P32297 AC099494.2-201ENST00000623371 978 ntBASIC5.32□□□□□ -1.56
CHRNA3P32297 AC135068.12-201ENST00000637370 931 ntBASIC5.32□□□□□ -1.56
CHRNA3P32297 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNA3P32297 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNA3P32297 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNA3P32297 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.32□□□□□ -1.56
CHRNA3P32297 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.32□□□□□ -1.56
CHRNA3P32297 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms