Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC091180.1-201ENST00000462104 372 ntBASIC5.24□□□□□ -1.57
PDGFBP01127 RN7SL319P-201ENST00000480656 221 ntBASIC5.24□□□□□ -1.57
PDGFBP01127 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.24□□□□□ -1.57
PDGFBP01127 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.24□□□□□ -1.57
PDGFBP01127 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.24□□□□□ -1.57
PDGFBP01127 IGKV1-32-201ENST00000519290 311 ntBASIC5.24□□□□□ -1.57
PDGFBP01127 AC084824.1-201ENST00000550917 1005 ntBASIC5.24□□□□□ -1.57
PDGFBP01127 OR11H3P-201ENST00000554547 982 ntBASIC5.24□□□□□ -1.57
PDGFBP01127 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.24□□□□□ -1.57
PDGFBP01127 AC021483.2-201ENST00000567415 758 ntBASIC5.24□□□□□ -1.57
PDGFBP01127 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.24□□□□□ -1.57
PDGFBP01127 AC012213.4-201ENST00000606457 354 ntBASIC5.24□□□□□ -1.57
PDGFBP01127 AC092653.1-201ENST00000608509 531 ntBASIC5.24□□□□□ -1.57
PDGFBP01127 AC005962.2-201ENST00000611427 652 ntBASIC5.24□□□□□ -1.57
PDGFBP01127 AC135068.5-201ENST00000624197 983 ntBASIC5.24□□□□□ -1.57
PDGFBP01127 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.24□□□□□ -1.57
PDGFBP01127 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.24□□□□□ -1.57
PDGFBP01127 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFBP01127 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.24□□□□□ -1.57
PDGFBP01127 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFBP01127 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFBP01127 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PDGFBP01127 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDGFBP01127 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDGFBP01127 KARSP3-201ENST00000571212 1504 ntBASIC5.23□□□□□ -1.57
PDGFBP01127 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PDGFBP01127 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDGFBP01127 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDGFBP01127 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PDGFBP01127 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PDGFBP01127 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PDGFBP01127 RNU6-386P-201ENST00000362650 107 ntBASIC5.23□□□□□ -1.57
PDGFBP01127 RNU1-136P-201ENST00000384181 164 ntBASIC5.23□□□□□ -1.57
PDGFBP01127 SNORA37-201ENST00000384504 129 ntBASIC5.23□□□□□ -1.57
PDGFBP01127 SNORA66-201ENST00000384792 133 ntBASIC5.23□□□□□ -1.57
PDGFBP01127 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PDGFBP01127 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PDGFBP01127 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.23□□□□□ -1.57
PDGFBP01127 AC021876.1-201ENST00000425959 359 ntBASIC5.23□□□□□ -1.57
PDGFBP01127 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.23□□□□□ -1.57
PDGFBP01127 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.23□□□□□ -1.57
PDGFBP01127 NPM1P33-201ENST00000438918 872 ntBASIC5.23□□□□□ -1.57
PDGFBP01127 TXNP5-201ENST00000441043 315 ntBASIC5.23□□□□□ -1.57
PDGFBP01127 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.23□□□□□ -1.57
PDGFBP01127 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.23□□□□□ -1.57
PDGFBP01127 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.23□□□□□ -1.57
PDGFBP01127 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.23□□□□□ -1.57
PDGFBP01127 RPL7AP10-201ENST00000481016 791 ntBASIC5.23□□□□□ -1.57
PDGFBP01127 AC013356.1-201ENST00000489027 564 ntBASIC5.23□□□□□ -1.57
PDGFBP01127 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.23□□□□□ -1.57
PDGFBP01127 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.23□□□□□ -1.57
PDGFBP01127 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.23□□□□□ -1.57
PDGFBP01127 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.23□□□□□ -1.57
PDGFBP01127 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.23□□□□□ -1.57
PDGFBP01127 AC109635.6-201ENST00000525487 1113 ntBASIC5.23□□□□□ -1.57
PDGFBP01127 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.23□□□□□ -1.57
PDGFBP01127 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.23□□□□□ -1.57
PDGFBP01127 AP001880.2-201ENST00000538233 448 ntBASIC5.23□□□□□ -1.57
PDGFBP01127 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.23□□□□□ -1.57
PDGFBP01127 AC122688.1-201ENST00000541494 223 ntBASIC5.23□□□□□ -1.57
PDGFBP01127 AL109766.1-201ENST00000555080 552 ntBASIC5.23□□□□□ -1.57
PDGFBP01127 EIF1AXP2-201ENST00000555940 413 ntBASIC5.23□□□□□ -1.57
PDGFBP01127 CD24P2-201ENST00000565486 219 ntBASIC5.23□□□□□ -1.57
PDGFBP01127 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC5.23□□□□□ -1.57
PDGFBP01127 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.23□□□□□ -1.57
PDGFBP01127 AC007620.3-201ENST00000608131 497 ntBASIC5.23□□□□□ -1.57
PDGFBP01127 AL122125.1-201ENST00000616999 600 ntBASIC5.23□□□□□ -1.57
PDGFBP01127 AC021106.3-201ENST00000623925 531 ntBASIC5.23□□□□□ -1.57
PDGFBP01127 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDGFBP01127 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.23□□□□□ -1.57
PDGFBP01127 AC006484.1-201ENST00000435086 1884 ntBASIC5.23□□□□□ -1.57
PDGFBP01127 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PDGFBP01127 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
PDGFBP01127 AC009962.1-201ENST00000567327 3813 ntBASIC5.23□□□□□ -1.57
PDGFBP01127 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.23□□□□□ -1.57
PDGFBP01127 AC093671.1-201ENST00000624981 2929 ntBASIC5.23□□□□□ -1.57
PDGFBP01127 AC087565.3-202ENST00000642085 1603 ntBASIC5.23□□□□□ -1.57
PDGFBP01127 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDGFBP01127 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
PDGFBP01127 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.22□□□□□ -1.57
PDGFBP01127 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
PDGFBP01127 AL121950.1-201ENST00000624993 2077 ntBASIC5.22□□□□□ -1.57
PDGFBP01127 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.22□□□□□ -1.57
PDGFBP01127 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDGFBP01127 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDGFBP01127 AL591135.1-201ENST00000401578 5914 ntBASIC5.22□□□□□ -1.57
PDGFBP01127 RNU4-7P-201ENST00000364758 141 ntBASIC5.22□□□□□ -1.57
PDGFBP01127 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PDGFBP01127 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDGFBP01127 RNU6-891P-201ENST00000384280 111 ntBASIC5.22□□□□□ -1.57
PDGFBP01127 RNGTTP1-201ENST00000420965 728 ntBASIC5.22□□□□□ -1.57
PDGFBP01127 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.22□□□□□ -1.57
PDGFBP01127 EIF2S2P2-201ENST00000447161 982 ntBASIC5.22□□□□□ -1.57
PDGFBP01127 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.22□□□□□ -1.57
PDGFBP01127 RPL31P20-201ENST00000449593 360 ntBASIC5.22□□□□□ -1.57
PDGFBP01127 AC002553.2-201ENST00000453217 340 ntBASIC5.22□□□□□ -1.57
PDGFBP01127 HAUS1P1-201ENST00000505275 832 ntBASIC5.22□□□□□ -1.57
PDGFBP01127 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.22□□□□□ -1.57
PDGFBP01127 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.22□□□□□ -1.57
PDGFBP01127 SEC11B-201ENST00000518383 499 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms