Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RAPGEF3O95398 OFD1P8Y-201ENST00000449148 1433 ntBASIC7.66□□□□□ -1.18
RAPGEF3O95398 DMD-205ENST00000359836 7339 ntTSL 5 BASIC7.66□□□□□ -1.18
RAPGEF3O95398 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
RAPGEF3O95398 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RAPGEF3O95398 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
RAPGEF3O95398 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
RAPGEF3O95398 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
RAPGEF3O95398 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
RAPGEF3O95398 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
RAPGEF3O95398 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
RAPGEF3O95398 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
RAPGEF3O95398 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC7.65□□□□□ -1.18
RAPGEF3O95398 AC025750.1-201ENST00000399891 379 ntBASIC7.65□□□□□ -1.18
RAPGEF3O95398 RN7SKP263-201ENST00000411194 309 ntBASIC7.65□□□□□ -1.18
RAPGEF3O95398 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC7.65□□□□□ -1.18
RAPGEF3O95398 GTF2IP5-201ENST00000414608 731 ntBASIC7.65□□□□□ -1.18
RAPGEF3O95398 TRIM60P17-201ENST00000415181 719 ntBASIC7.65□□□□□ -1.18
RAPGEF3O95398 RPL12P34-201ENST00000424532 479 ntBASIC7.65□□□□□ -1.18
RAPGEF3O95398 RPEP3-201ENST00000425462 676 ntBASIC7.65□□□□□ -1.18
RAPGEF3O95398 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC7.65□□□□□ -1.18
RAPGEF3O95398 ZNF965P-201ENST00000432501 817 ntBASIC7.65□□□□□ -1.18
RAPGEF3O95398 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC7.65□□□□□ -1.18
RAPGEF3O95398 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC7.65□□□□□ -1.18
RAPGEF3O95398 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC7.65□□□□□ -1.18
RAPGEF3O95398 CABYRP1-201ENST00000465493 1045 ntBASIC7.65□□□□□ -1.18
RAPGEF3O95398 AC093663.2-201ENST00000484625 313 ntBASIC7.65□□□□□ -1.18
RAPGEF3O95398 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC7.65□□□□□ -1.18
RAPGEF3O95398 PPM1AP1-201ENST00000502740 1135 ntBASIC7.65□□□□□ -1.18
RAPGEF3O95398 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC7.65□□□□□ -1.18
RAPGEF3O95398 SNORA76.2-201ENST00000517095 137 ntBASIC7.65□□□□□ -1.18
RAPGEF3O95398 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC7.65□□□□□ -1.18
RAPGEF3O95398 AC012339.2-201ENST00000523996 453 ntBASIC7.65□□□□□ -1.18
RAPGEF3O95398 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
RAPGEF3O95398 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC7.65□□□□□ -1.18
RAPGEF3O95398 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.65□□□□□ -1.18
RAPGEF3O95398 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC7.65□□□□□ -1.18
RAPGEF3O95398 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC7.65□□□□□ -1.18
RAPGEF3O95398 AC022893.2-201ENST00000564832 3296 ntBASIC7.65□□□□□ -1.18
RAPGEF3O95398 AC010547.7-201ENST00000570323 333 ntBASIC7.65□□□□□ -1.18
RAPGEF3O95398 AC023575.1-201ENST00000580510 358 ntBASIC7.65□□□□□ -1.18
RAPGEF3O95398 AC069366.1-201ENST00000583159 838 ntBASIC7.65□□□□□ -1.18
RAPGEF3O95398 ZNF92P2-201ENST00000600543 1059 ntBASIC7.65□□□□□ -1.18
RAPGEF3O95398 CYCSP1-201ENST00000604815 315 ntBASIC7.65□□□□□ -1.18
RAPGEF3O95398 AC027449.1-201ENST00000608890 407 ntBASIC7.65□□□□□ -1.18
RAPGEF3O95398 AL929601.4-201ENST00000613011 1341 ntBASIC7.65□□□□□ -1.18
RAPGEF3O95398 AC018926.1-201ENST00000616335 435 ntBASIC7.65□□□□□ -1.18
RAPGEF3O95398 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
RAPGEF3O95398 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC7.65□□□□□ -1.18
RAPGEF3O95398 AC063952.1-203ENST00000634410 658 ntBASIC7.65□□□□□ -1.18
RAPGEF3O95398 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC7.65□□□□□ -1.18
RAPGEF3O95398 AL445984.1-201ENST00000637834 659 ntBASIC7.65□□□□□ -1.18
RAPGEF3O95398 AC006927.4-201ENST00000639187 543 ntBASIC7.65□□□□□ -1.18
RAPGEF3O95398 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC7.65□□□□□ -1.19
RAPGEF3O95398 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
RAPGEF3O95398 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
RAPGEF3O95398 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RAPGEF3O95398 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RAPGEF3O95398 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
RAPGEF3O95398 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
RAPGEF3O95398 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RAPGEF3O95398 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RAPGEF3O95398 AL031651.1-201ENST00000615357 1438 ntBASIC7.64□□□□□ -1.19
RAPGEF3O95398 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.64□□□□□ -1.19
RAPGEF3O95398 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
RAPGEF3O95398 RNU6-40P-201ENST00000384254 107 ntBASIC7.64□□□□□ -1.19
RAPGEF3O95398 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RAPGEF3O95398 STAT4-203ENST00000409995 709 ntTSL 5 BASIC7.64□□□□□ -1.19
RAPGEF3O95398 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC7.64□□□□□ -1.19
RAPGEF3O95398 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC7.64□□□□□ -1.19
RAPGEF3O95398 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC7.64□□□□□ -1.19
RAPGEF3O95398 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC7.64□□□□□ -1.19
RAPGEF3O95398 NOP56P2-201ENST00000447491 769 ntBASIC7.64□□□□□ -1.19
RAPGEF3O95398 RPL31P20-201ENST00000449593 360 ntBASIC7.64□□□□□ -1.19
RAPGEF3O95398 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC7.64□□□□□ -1.19
RAPGEF3O95398 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC7.64□□□□□ -1.19
RAPGEF3O95398 AC112198.4-201ENST00000515450 351 ntBASIC7.64□□□□□ -1.19
RAPGEF3O95398 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.64□□□□□ -1.19
RAPGEF3O95398 MRPS21P9-201ENST00000571150 257 ntBASIC7.64□□□□□ -1.19
RAPGEF3O95398 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC7.64□□□□□ -1.19
RAPGEF3O95398 AC008785.1-201ENST00000624475 456 ntBASIC7.64□□□□□ -1.19
RAPGEF3O95398 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RAPGEF3O95398 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC7.64□□□□□ -1.19
RAPGEF3O95398 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RAPGEF3O95398 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC7.64□□□□□ -1.19
RAPGEF3O95398 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC7.64□□□□□ -1.19
RAPGEF3O95398 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RAPGEF3O95398 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RAPGEF3O95398 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RAPGEF3O95398 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.63□□□□□ -1.19
RAPGEF3O95398 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RAPGEF3O95398 AL359715.3-201ENST00000569267 2123 ntBASIC7.63□□□□□ -1.19
RAPGEF3O95398 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RAPGEF3O95398 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
RAPGEF3O95398 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
RAPGEF3O95398 RNU6-1331P-201ENST00000363658 106 ntBASIC7.63□□□□□ -1.19
RAPGEF3O95398 RPL32P23-201ENST00000397237 405 ntBASIC7.63□□□□□ -1.19
RAPGEF3O95398 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC7.63□□□□□ -1.19
RAPGEF3O95398 MTATP6P31-201ENST00000406985 692 ntBASIC7.63□□□□□ -1.19
RAPGEF3O95398 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms