Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
GPC4O75487 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
GPC4O75487 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
GPC4O75487 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.28□□□□□ -1.56
GPC4O75487 AC079298.1-201ENST00000625026 1619 ntBASIC5.28□□□□□ -1.56
GPC4O75487 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
GPC4O75487 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.28□□□□□ -1.56
GPC4O75487 RNU4-7P-201ENST00000364758 141 ntBASIC5.28□□□□□ -1.56
GPC4O75487 AC007618.1-201ENST00000366455 732 ntBASIC5.28□□□□□ -1.56
GPC4O75487 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
GPC4O75487 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
GPC4O75487 U3.25-201ENST00000391209 220 ntBASIC5.28□□□□□ -1.56
GPC4O75487 OR3A2-201ENST00000408891 1076 ntBASIC5.28□□□□□ -1.56
GPC4O75487 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.28□□□□□ -1.56
GPC4O75487 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.28□□□□□ -1.56
GPC4O75487 RPS26P13-201ENST00000419030 330 ntBASIC5.28□□□□□ -1.56
GPC4O75487 MARK2P12-201ENST00000420129 585 ntBASIC5.28□□□□□ -1.56
GPC4O75487 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.28□□□□□ -1.56
GPC4O75487 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.28□□□□□ -1.56
GPC4O75487 HSPD1P12-201ENST00000429127 1069 ntBASIC5.28□□□□□ -1.56
GPC4O75487 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.28□□□□□ -1.56
GPC4O75487 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.28□□□□□ -1.56
GPC4O75487 CYCSP12-201ENST00000437729 300 ntBASIC5.28□□□□□ -1.56
GPC4O75487 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.28□□□□□ -1.56
GPC4O75487 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.28□□□□□ -1.56
GPC4O75487 MTND2P39-201ENST00000457230 764 ntBASIC5.28□□□□□ -1.56
GPC4O75487 AC015908.1-201ENST00000478739 476 ntBASIC5.28□□□□□ -1.56
GPC4O75487 AC108693.1-201ENST00000496068 432 ntBASIC5.28□□□□□ -1.56
GPC4O75487 RN7SL591P-201ENST00000496150 292 ntBASIC5.28□□□□□ -1.56
GPC4O75487 MYL12BP2-201ENST00000503948 512 ntBASIC5.28□□□□□ -1.56
GPC4O75487 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.28□□□□□ -1.56
GPC4O75487 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
GPC4O75487 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.28□□□□□ -1.56
GPC4O75487 EIF3KP3-201ENST00000514461 639 ntBASIC5.28□□□□□ -1.56
GPC4O75487 AC112206.4-201ENST00000515142 405 ntBASIC5.28□□□□□ -1.56
GPC4O75487 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.28□□□□□ -1.56
GPC4O75487 VTA1P2-201ENST00000520205 911 ntBASIC5.28□□□□□ -1.56
GPC4O75487 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.28□□□□□ -1.56
GPC4O75487 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.28□□□□□ -1.56
GPC4O75487 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.28□□□□□ -1.56
GPC4O75487 AC023158.1-201ENST00000561632 1025 ntBASIC5.28□□□□□ -1.56
GPC4O75487 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.28□□□□□ -1.56
GPC4O75487 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.28□□□□□ -1.56
GPC4O75487 AC005341.1-201ENST00000571086 708 ntBASIC5.28□□□□□ -1.56
GPC4O75487 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.28□□□□□ -1.56
GPC4O75487 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.28□□□□□ -1.56
GPC4O75487 AC092953.2-201ENST00000608000 699 ntBASIC5.28□□□□□ -1.56
GPC4O75487 AC084824.5-201ENST00000612009 413 ntBASIC5.28□□□□□ -1.56
GPC4O75487 AC109583.2-201ENST00000617367 129 ntBASIC5.28□□□□□ -1.56
GPC4O75487 AP003400.3-201ENST00000624904 346 ntBASIC5.28□□□□□ -1.56
GPC4O75487 AL355480.1-201ENST00000629041 99 ntBASIC5.28□□□□□ -1.56
GPC4O75487 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.28□□□□□ -1.56
GPC4O75487 AL049767.1-202ENST00000637826 242 ntBASIC5.28□□□□□ -1.56
GPC4O75487 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
GPC4O75487 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
GPC4O75487 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
GPC4O75487 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
GPC4O75487 CASC19-281ENST00000642118 1554 ntBASIC5.28□□□□□ -1.56
GPC4O75487 AC021242.1-201ENST00000507315 2035 ntBASIC5.28□□□□□ -1.56
GPC4O75487 AC011755.1-201ENST00000623763 2049 ntBASIC5.28□□□□□ -1.56
GPC4O75487 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.28□□□□□ -1.56
GPC4O75487 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
GPC4O75487 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
GPC4O75487 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.27□□□□□ -1.57
GPC4O75487 ADAM5-202ENST00000399789 1942 ntBASIC5.27□□□□□ -1.57
GPC4O75487 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
GPC4O75487 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
GPC4O75487 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.27□□□□□ -1.57
GPC4O75487 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
GPC4O75487 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
GPC4O75487 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
GPC4O75487 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
GPC4O75487 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
GPC4O75487 RNU6-650P-201ENST00000365658 111 ntBASIC5.27□□□□□ -1.57
GPC4O75487 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
GPC4O75487 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
GPC4O75487 AC009804.1-201ENST00000400949 179 ntBASIC5.27□□□□□ -1.57
GPC4O75487 RPL21P67-201ENST00000402896 478 ntBASIC5.27□□□□□ -1.57
GPC4O75487 RN7SKP97-201ENST00000410966 333 ntBASIC5.27□□□□□ -1.57
GPC4O75487 AL390774.1-201ENST00000411924 246 ntBASIC5.27□□□□□ -1.57
GPC4O75487 COX5BP7-201ENST00000414780 274 ntBASIC5.27□□□□□ -1.57
GPC4O75487 AL121882.1-201ENST00000422893 417 ntBASIC5.27□□□□□ -1.57
GPC4O75487 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
GPC4O75487 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.27□□□□□ -1.57
GPC4O75487 AC090018.1-201ENST00000434369 367 ntBASIC5.27□□□□□ -1.57
GPC4O75487 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.27□□□□□ -1.57
GPC4O75487 SPRYD7P1-201ENST00000443861 570 ntBASIC5.27□□□□□ -1.57
GPC4O75487 AC006326.1-201ENST00000445465 787 ntBASIC5.27□□□□□ -1.57
GPC4O75487 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.27□□□□□ -1.57
GPC4O75487 AC022133.1-201ENST00000490961 571 ntBASIC5.27□□□□□ -1.57
GPC4O75487 ENPP7P11-201ENST00000505915 627 ntBASIC5.27□□□□□ -1.57
GPC4O75487 AC106872.4-201ENST00000510050 523 ntBASIC5.27□□□□□ -1.57
GPC4O75487 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.27□□□□□ -1.57
GPC4O75487 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.27□□□□□ -1.57
GPC4O75487 SNORA76.2-201ENST00000517095 137 ntBASIC5.27□□□□□ -1.57
GPC4O75487 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.27□□□□□ -1.57
GPC4O75487 HAUS1P3-201ENST00000523909 662 ntBASIC5.27□□□□□ -1.57
GPC4O75487 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.27□□□□□ -1.57
GPC4O75487 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
GPC4O75487 AC092451.2-201ENST00000538746 658 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms