Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM38O00635 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.7□□□□□ -1.5
TRIM38O00635 OR13Z1P-201ENST00000416141 834 ntBASIC5.7□□□□□ -1.5
TRIM38O00635 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM38O00635 TNPO1P1-201ENST00000423641 1138 ntBASIC5.7□□□□□ -1.5
TRIM38O00635 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM38O00635 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM38O00635 FO393419.3-201ENST00000428741 282 ntBASIC5.7□□□□□ -1.5
TRIM38O00635 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM38O00635 ETF1P3-201ENST00000430422 1160 ntBASIC5.7□□□□□ -1.5
TRIM38O00635 CFL1P1-202ENST00000432948 411 ntBASIC5.7□□□□□ -1.5
TRIM38O00635 AC005297.1-201ENST00000444765 862 ntBASIC5.7□□□□□ -1.5
TRIM38O00635 AC023271.1-201ENST00000445936 1090 ntBASIC5.7□□□□□ -1.5
TRIM38O00635 AC099063.2-201ENST00000446360 662 ntBASIC5.7□□□□□ -1.5
TRIM38O00635 AL035551.1-201ENST00000446931 348 ntBASIC5.7□□□□□ -1.5
TRIM38O00635 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM38O00635 RN7SL197P-201ENST00000466981 299 ntBASIC5.7□□□□□ -1.5
TRIM38O00635 OR7E157P-201ENST00000494376 911 ntBASIC5.7□□□□□ -1.5
TRIM38O00635 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM38O00635 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM38O00635 AC090424.1-201ENST00000535243 736 ntBASIC5.7□□□□□ -1.5
TRIM38O00635 IGBP1P1-201ENST00000554337 1009 ntBASIC5.7□□□□□ -1.5
TRIM38O00635 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM38O00635 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM38O00635 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM38O00635 MIR4675-201ENST00000577898 77 ntBASIC5.7□□□□□ -1.5
TRIM38O00635 MIR1269B-201ENST00000580405 75 ntBASIC5.7□□□□□ -1.5
TRIM38O00635 AL513327.3-201ENST00000602618 469 ntBASIC5.7□□□□□ -1.5
TRIM38O00635 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM38O00635 AC211433.2-201ENST00000608433 387 ntBASIC5.7□□□□□ -1.5
TRIM38O00635 RNU6-1192P-201ENST00000612197 107 ntBASIC5.7□□□□□ -1.5
TRIM38O00635 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM38O00635 RNU6-489P-201ENST00000618289 107 ntBASIC5.7□□□□□ -1.5
TRIM38O00635 AC074140.1-201ENST00000621617 208 ntBASIC5.7□□□□□ -1.5
TRIM38O00635 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM38O00635 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM38O00635 MTCO1P18-201ENST00000455518 1419 ntBASIC5.7□□□□□ -1.5
TRIM38O00635 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM38O00635 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM38O00635 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM38O00635 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM38O00635 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM38O00635 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
TRIM38O00635 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM38O00635 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM38O00635 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
TRIM38O00635 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM38O00635 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM38O00635 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
TRIM38O00635 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM38O00635 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM38O00635 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM38O00635 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM38O00635 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM38O00635 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM38O00635 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM38O00635 AC012321.1-201ENST00000561622 1588 ntBASIC5.69□□□□□ -1.5
TRIM38O00635 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM38O00635 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM38O00635 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM38O00635 RNA5SP211-201ENST00000365516 117 ntBASIC5.69□□□□□ -1.5
TRIM38O00635 RNU6-207P-201ENST00000384137 107 ntBASIC5.69□□□□□ -1.5
TRIM38O00635 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TRIM38O00635 AL445183.3-201ENST00000414168 502 ntBASIC5.69□□□□□ -1.5
TRIM38O00635 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
TRIM38O00635 RPS4XP16-201ENST00000427198 791 ntBASIC5.69□□□□□ -1.5
TRIM38O00635 CRIP1P1-201ENST00000427567 185 ntBASIC5.69□□□□□ -1.5
TRIM38O00635 AC093422.3-201ENST00000428506 305 ntBASIC5.69□□□□□ -1.5
TRIM38O00635 AL022331.1-201ENST00000429025 477 ntBASIC5.69□□□□□ -1.5
TRIM38O00635 CETN4P-201ENST00000432407 469 ntBASIC5.69□□□□□ -1.5
TRIM38O00635 DEFA9P-201ENST00000433042 285 ntBASIC5.69□□□□□ -1.5
TRIM38O00635 AC011242.1-201ENST00000433596 1158 ntBASIC5.69□□□□□ -1.5
TRIM38O00635 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM38O00635 FMO7P-201ENST00000436045 768 ntBASIC5.69□□□□□ -1.5
TRIM38O00635 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM38O00635 MTCO2P3-201ENST00000442543 421 ntBASIC5.69□□□□□ -1.5
TRIM38O00635 SPRYD7P1-201ENST00000443861 570 ntBASIC5.69□□□□□ -1.5
TRIM38O00635 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM38O00635 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM38O00635 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM38O00635 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.69□□□□□ -1.5
TRIM38O00635 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM38O00635 SCARNA6.1-201ENST00000516989 238 ntBASIC5.69□□□□□ -1.5
TRIM38O00635 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM38O00635 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM38O00635 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM38O00635 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM38O00635 YWHAZP1-201ENST00000556286 722 ntBASIC5.69□□□□□ -1.5
TRIM38O00635 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM38O00635 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.69□□□□□ -1.5
TRIM38O00635 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM38O00635 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM38O00635 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM38O00635 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM38O00635 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM38O00635 AC100847.1-201ENST00000611316 481 ntBASIC5.69□□□□□ -1.5
TRIM38O00635 AC087683.2-201ENST00000611384 326 ntBASIC5.69□□□□□ -1.5
TRIM38O00635 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM38O00635 AC007204.2-201ENST00000615022 616 ntBASIC5.69□□□□□ -1.5
TRIM38O00635 AC013470.4-201ENST00000619978 986 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms