Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC105031.1-201ENST00000518550 476 ntBASIC4.93□□□□□ -1.62
PDLIM1O00151 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.93□□□□□ -1.62
PDLIM1O00151 MRPS21P7-201ENST00000566937 238 ntBASIC4.93□□□□□ -1.62
PDLIM1O00151 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.93□□□□□ -1.62
PDLIM1O00151 AL589674.2-201ENST00000604304 337 ntBASIC4.93□□□□□ -1.62
PDLIM1O00151 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.93□□□□□ -1.62
PDLIM1O00151 AC004477.3-201ENST00000614061 590 ntBASIC4.93□□□□□ -1.62
PDLIM1O00151 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.93□□□□□ -1.62
PDLIM1O00151 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM1O00151 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM1O00151 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM1O00151 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM1O00151 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.93□□□□□ -1.62
PDLIM1O00151 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PDLIM1O00151 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
PDLIM1O00151 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PDLIM1O00151 AL445487.1-201ENST00000415694 1580 ntBASIC4.92□□□□□ -1.62
PDLIM1O00151 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
PDLIM1O00151 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
PDLIM1O00151 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.92□□□□□ -1.62
PDLIM1O00151 MIR448-201ENST00000362131 111 ntBASIC4.92□□□□□ -1.62
PDLIM1O00151 RNA5SP502-201ENST00000362694 119 ntBASIC4.92□□□□□ -1.62
PDLIM1O00151 RN7SKP153-201ENST00000365026 316 ntBASIC4.92□□□□□ -1.62
PDLIM1O00151 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PDLIM1O00151 SNORA16A-201ENST00000384342 137 ntBASIC4.92□□□□□ -1.62
PDLIM1O00151 RNU6-1263P-201ENST00000384601 106 ntBASIC4.92□□□□□ -1.62
PDLIM1O00151 MIR589-201ENST00000385238 99 ntBASIC4.92□□□□□ -1.62
PDLIM1O00151 RNA5SP372-201ENST00000390836 115 ntBASIC4.92□□□□□ -1.62
PDLIM1O00151 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.92□□□□□ -1.62
PDLIM1O00151 RAB9AP4-201ENST00000415230 609 ntBASIC4.92□□□□□ -1.62
PDLIM1O00151 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.92□□□□□ -1.62
PDLIM1O00151 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.92□□□□□ -1.62
PDLIM1O00151 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.92□□□□□ -1.62
PDLIM1O00151 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.92□□□□□ -1.62
PDLIM1O00151 AL121776.1-201ENST00000429337 372 ntBASIC4.92□□□□□ -1.62
PDLIM1O00151 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.92□□□□□ -1.62
PDLIM1O00151 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.92□□□□□ -1.62
PDLIM1O00151 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.92□□□□□ -1.62
PDLIM1O00151 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PDLIM1O00151 RN7SL817P-201ENST00000480777 288 ntBASIC4.92□□□□□ -1.62
PDLIM1O00151 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.92□□□□□ -1.62
PDLIM1O00151 AC020890.1-201ENST00000491837 504 ntBASIC4.92□□□□□ -1.62
PDLIM1O00151 AL136038.1-201ENST00000497246 351 ntBASIC4.92□□□□□ -1.62
PDLIM1O00151 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.92□□□□□ -1.62
PDLIM1O00151 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.92□□□□□ -1.62
PDLIM1O00151 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.92□□□□□ -1.62
PDLIM1O00151 GSTP1P1-201ENST00000548078 319 ntBASIC4.92□□□□□ -1.62
PDLIM1O00151 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.92□□□□□ -1.62
PDLIM1O00151 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
PDLIM1O00151 RBM22P12-201ENST00000567098 1255 ntBASIC4.92□□□□□ -1.62
PDLIM1O00151 RN7SL356P-201ENST00000582228 248 ntBASIC4.92□□□□□ -1.62
PDLIM1O00151 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.92□□□□□ -1.62
PDLIM1O00151 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.92□□□□□ -1.62
PDLIM1O00151 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.92□□□□□ -1.62
PDLIM1O00151 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.92□□□□□ -1.62
PDLIM1O00151 RMST_9.1-201ENST00000619945 193 ntBASIC4.92□□□□□ -1.62
PDLIM1O00151 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.92□□□□□ -1.62
PDLIM1O00151 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.92□□□□□ -1.62
PDLIM1O00151 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.92□□□□□ -1.62
PDLIM1O00151 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.92□□□□□ -1.62
PDLIM1O00151 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.92□□□□□ -1.62
PDLIM1O00151 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.92□□□□□ -1.62
PDLIM1O00151 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PDLIM1O00151 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.92□□□□□ -1.62
PDLIM1O00151 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PDLIM1O00151 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDLIM1O00151 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
PDLIM1O00151 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDLIM1O00151 AC023421.1-201ENST00000590535 1785 ntBASIC4.91□□□□□ -1.62
PDLIM1O00151 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PDLIM1O00151 RNU1-108P-201ENST00000362556 161 ntBASIC4.91□□□□□ -1.62
PDLIM1O00151 RN7SKP124-201ENST00000364730 341 ntBASIC4.91□□□□□ -1.62
PDLIM1O00151 U3.25-201ENST00000391209 220 ntBASIC4.91□□□□□ -1.62
PDLIM1O00151 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.91□□□□□ -1.62
PDLIM1O00151 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.91□□□□□ -1.62
PDLIM1O00151 OR6D1P-201ENST00000436165 939 ntBASIC4.91□□□□□ -1.62
PDLIM1O00151 AL138787.1-202ENST00000437804 898 ntBASIC4.91□□□□□ -1.62
PDLIM1O00151 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PDLIM1O00151 AL357520.1-201ENST00000441557 453 ntBASIC4.91□□□□□ -1.62
PDLIM1O00151 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.91□□□□□ -1.62
PDLIM1O00151 AC019185.1-201ENST00000442718 389 ntBASIC4.91□□□□□ -1.62
PDLIM1O00151 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.91□□□□□ -1.62
PDLIM1O00151 PPIAP20-201ENST00000449839 135 ntBASIC4.91□□□□□ -1.62
PDLIM1O00151 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.91□□□□□ -1.62
PDLIM1O00151 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.91□□□□□ -1.62
PDLIM1O00151 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.91□□□□□ -1.62
PDLIM1O00151 AC107015.1-201ENST00000466902 747 ntBASIC4.91□□□□□ -1.62
PDLIM1O00151 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
PDLIM1O00151 UBA52P3-201ENST00000491303 382 ntBASIC4.91□□□□□ -1.62
PDLIM1O00151 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.91□□□□□ -1.62
PDLIM1O00151 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.91□□□□□ -1.62
PDLIM1O00151 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.91□□□□□ -1.62
PDLIM1O00151 AC122134.1-201ENST00000565664 1104 ntBASIC4.91□□□□□ -1.62
PDLIM1O00151 AC015720.2-201ENST00000567709 334 ntBASIC4.91□□□□□ -1.62
PDLIM1O00151 SNORD39.2-201ENST00000579995 76 ntBASIC4.91□□□□□ -1.62
PDLIM1O00151 NPM1P45-201ENST00000583151 559 ntBASIC4.91□□□□□ -1.62
PDLIM1O00151 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.91□□□□□ -1.62
PDLIM1O00151 AC012616.1-201ENST00000600294 197 ntBASIC4.91□□□□□ -1.62
PDLIM1O00151 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.91□□□□□ -1.62
PDLIM1O00151 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms