Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 AC100784.1-201ENST00000522790 310 ntBASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 OR11J2P-201ENST00000555298 907 ntBASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 AC211433.2-201ENST00000608433 387 ntBASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 AC006840.1-201ENST00000623069 542 ntBASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 AC112198.2-201ENST00000426589 6996 ntBASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 TRIM51GP-201ENST00000534741 1350 ntBASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 ZNF733P-202ENST00000444809 1573 ntBASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 AC132825.1-201ENST00000463573 2247 ntBASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 SNORA17.1-201ENST00000362945 126 ntBASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 RNU6-249P-201ENST00000363016 102 ntBASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 AL390316.1-201ENST00000406279 553 ntBASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 AL358178.1-201ENST00000407698 397 ntBASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 RN7SKP126-201ENST00000411143 300 ntBASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 AC005033.1-201ENST00000428904 813 ntBASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 NDUFA5P8-201ENST00000449019 346 ntBASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 LARP7P4-201ENST00000481075 878 ntBASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 AC004815.1-201ENST00000484185 331 ntBASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 AL049874.2-201ENST00000492636 288 ntBASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 LSM3P2-201ENST00000551246 273 ntBASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 AP005432.2-201ENST00000608162 586 ntBASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 AC019131.2-201ENST00000609071 870 ntBASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 AC084036.1-201ENST00000609190 508 ntBASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 AL121612.2-201ENST00000612261 482 ntBASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 AC108359.1-201ENST00000616451 1211 ntBASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.87□□□□□ -1.63
ATG4BQ9Y4P1 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 RN7SKP74-201ENST00000362849 309 ntBASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 NPM1P10-201ENST00000398310 865 ntBASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 RPL21P67-201ENST00000402896 478 ntBASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 PCNPP4-201ENST00000414817 517 ntBASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms