Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RHOT1P3-201ENST00000436571 331 ntBASIC5.21□□□□□ -1.58
RPRD1AQ96P16 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.21□□□□□ -1.58
RPRD1AQ96P16 IGHV5-78-201ENST00000450948 295 ntBASIC5.21□□□□□ -1.58
RPRD1AQ96P16 RPL7AP10-201ENST00000481016 791 ntBASIC5.21□□□□□ -1.58
RPRD1AQ96P16 RN7SL97P-201ENST00000486780 299 ntBASIC5.21□□□□□ -1.58
RPRD1AQ96P16 NDUFA5P12-201ENST00000503796 343 ntBASIC5.21□□□□□ -1.58
RPRD1AQ96P16 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.21□□□□□ -1.58
RPRD1AQ96P16 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.21□□□□□ -1.58
RPRD1AQ96P16 AC110775.1-201ENST00000513721 462 ntBASIC5.21□□□□□ -1.58
RPRD1AQ96P16 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.21□□□□□ -1.58
RPRD1AQ96P16 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RPRD1AQ96P16 RPS27AP18-201ENST00000515536 459 ntBASIC5.21□□□□□ -1.58
RPRD1AQ96P16 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.21□□□□□ -1.58
RPRD1AQ96P16 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.21□□□□□ -1.58
RPRD1AQ96P16 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.21□□□□□ -1.58
RPRD1AQ96P16 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.21□□□□□ -1.58
RPRD1AQ96P16 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RPRD1AQ96P16 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.21□□□□□ -1.58
RPRD1AQ96P16 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.21□□□□□ -1.58
RPRD1AQ96P16 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.21□□□□□ -1.58
RPRD1AQ96P16 AC108359.1-201ENST00000616451 1211 ntBASIC5.21□□□□□ -1.58
RPRD1AQ96P16 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.21□□□□□ -1.58
RPRD1AQ96P16 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RPRD1AQ96P16 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RPRD1AQ96P16 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RPRD1AQ96P16 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RPRD1AQ96P16 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RPRD1AQ96P16 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RPRD1AQ96P16 AC022417.1-201ENST00000624768 1303 ntBASIC5.21□□□□□ -1.58
RPRD1AQ96P16 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.21□□□□□ -1.58
RPRD1AQ96P16 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.21□□□□□ -1.58
RPRD1AQ96P16 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RPRD1AQ96P16 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RPRD1AQ96P16 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RPRD1AQ96P16 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
RPRD1AQ96P16 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
RPRD1AQ96P16 SNORA58B-201ENST00000364259 136 ntBASIC5.2□□□□□ -1.58
RPRD1AQ96P16 BMS1P3-201ENST00000372011 932 ntBASIC5.2□□□□□ -1.58
RPRD1AQ96P16 Z97832.1-201ENST00000402490 328 ntBASIC5.2□□□□□ -1.58
RPRD1AQ96P16 SNORA77-201ENST00000408716 125 ntBASIC5.2□□□□□ -1.58
RPRD1AQ96P16 TRGV7-201ENST00000427089 353 ntBASIC5.2□□□□□ -1.58
RPRD1AQ96P16 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.2□□□□□ -1.58
RPRD1AQ96P16 AC092447.2-201ENST00000435487 669 ntBASIC5.2□□□□□ -1.58
RPRD1AQ96P16 PSMD10P3-201ENST00000437000 448 ntBASIC5.2□□□□□ -1.58
RPRD1AQ96P16 RPL7L1P1-201ENST00000448259 785 ntBASIC5.2□□□□□ -1.58
RPRD1AQ96P16 TCEA1P1-201ENST00000449716 880 ntBASIC5.2□□□□□ -1.58
RPRD1AQ96P16 PRPF38AP1-201ENST00000451976 933 ntBASIC5.2□□□□□ -1.58
RPRD1AQ96P16 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.2□□□□□ -1.58
RPRD1AQ96P16 AC008410.1-201ENST00000483777 339 ntBASIC5.2□□□□□ -1.58
RPRD1AQ96P16 AC005412.2-201ENST00000492004 341 ntBASIC5.2□□□□□ -1.58
RPRD1AQ96P16 AL049874.2-201ENST00000492636 288 ntBASIC5.2□□□□□ -1.58
RPRD1AQ96P16 RPL37AP8-201ENST00000494116 276 ntBASIC5.2□□□□□ -1.58
RPRD1AQ96P16 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.2□□□□□ -1.58
RPRD1AQ96P16 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.2□□□□□ -1.58
RPRD1AQ96P16 AP001960.1-201ENST00000506494 658 ntBASIC5.2□□□□□ -1.58
RPRD1AQ96P16 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RPRD1AQ96P16 RNA5SP43-201ENST00000516559 110 ntBASIC5.2□□□□□ -1.58
RPRD1AQ96P16 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.2□□□□□ -1.58
RPRD1AQ96P16 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.2□□□□□ -1.58
RPRD1AQ96P16 AC125612.1-201ENST00000547580 377 ntBASIC5.2□□□□□ -1.58
RPRD1AQ96P16 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.2□□□□□ -1.58
RPRD1AQ96P16 NDUFB4P11-201ENST00000560510 395 ntBASIC5.2□□□□□ -1.58
RPRD1AQ96P16 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.2□□□□□ -1.58
RPRD1AQ96P16 MIR4646-201ENST00000580775 63 ntBASIC5.2□□□□□ -1.58
RPRD1AQ96P16 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.2□□□□□ -1.58
RPRD1AQ96P16 MIR3936-201ENST00000584304 110 ntBASIC5.2□□□□□ -1.58
RPRD1AQ96P16 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.2□□□□□ -1.58
RPRD1AQ96P16 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.2□□□□□ -1.58
RPRD1AQ96P16 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RPRD1AQ96P16 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RPRD1AQ96P16 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.2□□□□□ -1.58
RPRD1AQ96P16 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RPRD1AQ96P16 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RPRD1AQ96P16 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RPRD1AQ96P16 AC131971.1-201ENST00000332881 1482 ntBASIC5.2□□□□□ -1.58
RPRD1AQ96P16 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RPRD1AQ96P16 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RPRD1AQ96P16 TRIM51GP-201ENST00000534741 1350 ntBASIC5.19□□□□□ -1.58
RPRD1AQ96P16 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.19□□□□□ -1.58
RPRD1AQ96P16 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RPRD1AQ96P16 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RPRD1AQ96P16 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RPRD1AQ96P16 RNA5SP123-201ENST00000363244 119 ntBASIC5.19□□□□□ -1.58
RPRD1AQ96P16 RNA5SP428-201ENST00000365129 132 ntBASIC5.19□□□□□ -1.58
RPRD1AQ96P16 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.19□□□□□ -1.58
RPRD1AQ96P16 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RPRD1AQ96P16 SNORA70.10-201ENST00000384515 134 ntBASIC5.19□□□□□ -1.58
RPRD1AQ96P16 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.19□□□□□ -1.58
RPRD1AQ96P16 AC006455.6-201ENST00000426192 893 ntBASIC5.19□□□□□ -1.58
RPRD1AQ96P16 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RPRD1AQ96P16 OR6C71P-201ENST00000432580 913 ntBASIC5.19□□□□□ -1.58
RPRD1AQ96P16 NPM1P33-201ENST00000438918 872 ntBASIC5.19□□□□□ -1.58
RPRD1AQ96P16 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.19□□□□□ -1.58
RPRD1AQ96P16 OR7E125P-201ENST00000443450 846 ntBASIC5.19□□□□□ -1.58
RPRD1AQ96P16 AL137845.2-201ENST00000444292 988 ntBASIC5.19□□□□□ -1.58
RPRD1AQ96P16 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.19□□□□□ -1.58
RPRD1AQ96P16 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.19□□□□□ -1.58
RPRD1AQ96P16 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.19□□□□□ -1.58
RPRD1AQ96P16 NIFKP7-201ENST00000503365 834 ntBASIC5.19□□□□□ -1.58
RPRD1AQ96P16 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms