Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
USP41Q3LFD5 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
USP41Q3LFD5 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
USP41Q3LFD5 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
USP41Q3LFD5 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
USP41Q3LFD5 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.59□□□□□ -1.51
USP41Q3LFD5 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
USP41Q3LFD5 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
USP41Q3LFD5 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.59□□□□□ -1.52
USP41Q3LFD5 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USP41Q3LFD5 AC011755.1-201ENST00000623763 2049 ntBASIC5.58□□□□□ -1.52
USP41Q3LFD5 INTS6P1-201ENST00000504674 2530 ntBASIC5.58□□□□□ -1.52
USP41Q3LFD5 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.58□□□□□ -1.52
USP41Q3LFD5 AC006484.1-201ENST00000435086 1884 ntBASIC5.58□□□□□ -1.52
USP41Q3LFD5 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
USP41Q3LFD5 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.58□□□□□ -1.52
USP41Q3LFD5 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.58□□□□□ -1.52
USP41Q3LFD5 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USP41Q3LFD5 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.58□□□□□ -1.52
USP41Q3LFD5 RN7SKP104-201ENST00000362605 328 ntBASIC5.58□□□□□ -1.52
USP41Q3LFD5 SNORA51.8-201ENST00000384234 132 ntBASIC5.58□□□□□ -1.52
USP41Q3LFD5 RNU6-40P-201ENST00000384254 107 ntBASIC5.58□□□□□ -1.52
USP41Q3LFD5 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.58□□□□□ -1.52
USP41Q3LFD5 GJA6P-201ENST00000415117 1042 ntBASIC5.58□□□□□ -1.52
USP41Q3LFD5 EI24P4-201ENST00000423683 1078 ntBASIC5.58□□□□□ -1.52
USP41Q3LFD5 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.58□□□□□ -1.52
USP41Q3LFD5 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.58□□□□□ -1.52
USP41Q3LFD5 RPL12P18-201ENST00000437175 325 ntBASIC5.58□□□□□ -1.52
USP41Q3LFD5 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.58□□□□□ -1.52
USP41Q3LFD5 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.58□□□□□ -1.52
USP41Q3LFD5 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.58□□□□□ -1.52
USP41Q3LFD5 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USP41Q3LFD5 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.58□□□□□ -1.52
USP41Q3LFD5 AC112206.4-201ENST00000515142 405 ntBASIC5.58□□□□□ -1.52
USP41Q3LFD5 RN7SKP260-201ENST00000516907 149 ntBASIC5.58□□□□□ -1.52
USP41Q3LFD5 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.58□□□□□ -1.52
USP41Q3LFD5 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.58□□□□□ -1.52
USP41Q3LFD5 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.58□□□□□ -1.52
USP41Q3LFD5 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.58□□□□□ -1.52
USP41Q3LFD5 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.58□□□□□ -1.52
USP41Q3LFD5 MIR4480-201ENST00000582492 71 ntBASIC5.58□□□□□ -1.52
USP41Q3LFD5 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.58□□□□□ -1.52
USP41Q3LFD5 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.58□□□□□ -1.52
USP41Q3LFD5 AC098483.2-201ENST00000603158 454 ntBASIC5.58□□□□□ -1.52
USP41Q3LFD5 AC104785.1-201ENST00000603220 588 ntBASIC5.58□□□□□ -1.52
USP41Q3LFD5 AC006363.1-201ENST00000603806 463 ntBASIC5.58□□□□□ -1.52
USP41Q3LFD5 AC067838.1-201ENST00000606064 577 ntBASIC5.58□□□□□ -1.52
USP41Q3LFD5 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.58□□□□□ -1.52
USP41Q3LFD5 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.58□□□□□ -1.52
USP41Q3LFD5 AC092953.2-201ENST00000608000 699 ntBASIC5.58□□□□□ -1.52
USP41Q3LFD5 MIR6748-201ENST00000610433 71 ntBASIC5.58□□□□□ -1.52
USP41Q3LFD5 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.58□□□□□ -1.52
USP41Q3LFD5 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.58□□□□□ -1.52
USP41Q3LFD5 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.58□□□□□ -1.52
USP41Q3LFD5 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USP41Q3LFD5 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USP41Q3LFD5 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USP41Q3LFD5 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
USP41Q3LFD5 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
USP41Q3LFD5 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USP41Q3LFD5 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USP41Q3LFD5 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
USP41Q3LFD5 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USP41Q3LFD5 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USP41Q3LFD5 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
USP41Q3LFD5 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.58□□□□□ -1.52
USP41Q3LFD5 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
USP41Q3LFD5 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
USP41Q3LFD5 AC100757.1-201ENST00000616872 1835 ntBASIC5.58□□□□□ -1.52
USP41Q3LFD5 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP41Q3LFD5 AC006206.1-201ENST00000544842 3387 ntBASIC5.57□□□□□ -1.52
USP41Q3LFD5 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
USP41Q3LFD5 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP41Q3LFD5 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP41Q3LFD5 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
USP41Q3LFD5 RN7SKP115-201ENST00000363177 317 ntBASIC5.57□□□□□ -1.52
USP41Q3LFD5 RNA5SP90-201ENST00000364801 99 ntBASIC5.57□□□□□ -1.52
USP41Q3LFD5 AL035419.1-201ENST00000397037 564 ntBASIC5.57□□□□□ -1.52
USP41Q3LFD5 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.57□□□□□ -1.52
USP41Q3LFD5 AC073464.3-201ENST00000422564 712 ntBASIC5.57□□□□□ -1.52
USP41Q3LFD5 AC023141.6-201ENST00000429418 337 ntBASIC5.57□□□□□ -1.52
USP41Q3LFD5 MTND2P21-201ENST00000436242 1042 ntBASIC5.57□□□□□ -1.52
USP41Q3LFD5 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP41Q3LFD5 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.57□□□□□ -1.52
USP41Q3LFD5 Z80107.2-201ENST00000445127 392 ntBASIC5.57□□□□□ -1.52
USP41Q3LFD5 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.57□□□□□ -1.52
USP41Q3LFD5 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.57□□□□□ -1.52
USP41Q3LFD5 snoU13.20-201ENST00000459180 104 ntBASIC5.57□□□□□ -1.52
USP41Q3LFD5 RPS3AP41-201ENST00000462701 778 ntBASIC5.57□□□□□ -1.52
USP41Q3LFD5 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.57□□□□□ -1.52
USP41Q3LFD5 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.57□□□□□ -1.52
USP41Q3LFD5 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.57□□□□□ -1.52
USP41Q3LFD5 SUMO2P4-201ENST00000504193 276 ntBASIC5.57□□□□□ -1.52
USP41Q3LFD5 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.57□□□□□ -1.52
USP41Q3LFD5 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.57□□□□□ -1.52
USP41Q3LFD5 AC020937.1-201ENST00000519677 1013 ntBASIC5.57□□□□□ -1.52
USP41Q3LFD5 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.57□□□□□ -1.52
USP41Q3LFD5 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.57□□□□□ -1.52
USP41Q3LFD5 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.57□□□□□ -1.52
USP41Q3LFD5 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms