Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC090286.3-201ENST00000573133 187 ntBASIC5.75□□□□□ -1.49
GABPAQ06546 RN7SL802P-201ENST00000577858 299 ntBASIC5.75□□□□□ -1.49
GABPAQ06546 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.75□□□□□ -1.49
GABPAQ06546 AC022726.1-201ENST00000587475 207 ntBASIC5.75□□□□□ -1.49
GABPAQ06546 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.75□□□□□ -1.49
GABPAQ06546 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.75□□□□□ -1.49
GABPAQ06546 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.75□□□□□ -1.49
GABPAQ06546 AP005432.1-201ENST00000580891 3485 ntBASIC5.75□□□□□ -1.49
GABPAQ06546 TRIM51GP-201ENST00000534741 1350 ntBASIC5.75□□□□□ -1.49
GABPAQ06546 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.75□□□□□ -1.49
GABPAQ06546 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
GABPAQ06546 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
GABPAQ06546 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.75□□□□□ -1.49
GABPAQ06546 AL078595.2-201ENST00000605309 1780 ntBASIC5.75□□□□□ -1.49
GABPAQ06546 AC026523.2-201ENST00000625039 7739 ntBASIC5.75□□□□□ -1.49
GABPAQ06546 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
GABPAQ06546 AC068446.1-201ENST00000556425 1549 ntBASIC5.74□□□□□ -1.49
GABPAQ06546 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
GABPAQ06546 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
GABPAQ06546 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GABPAQ06546 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.74□□□□□ -1.49
GABPAQ06546 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.74□□□□□ -1.49
GABPAQ06546 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
GABPAQ06546 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
GABPAQ06546 AL050305.1-201ENST00000399993 1230 ntBASIC5.74□□□□□ -1.49
GABPAQ06546 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.74□□□□□ -1.49
GABPAQ06546 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GABPAQ06546 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.74□□□□□ -1.49
GABPAQ06546 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.74□□□□□ -1.49
GABPAQ06546 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.74□□□□□ -1.49
GABPAQ06546 MTND4LP12-201ENST00000448237 295 ntBASIC5.74□□□□□ -1.49
GABPAQ06546 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.74□□□□□ -1.49
GABPAQ06546 AC010326.1-201ENST00000462726 602 ntBASIC5.74□□□□□ -1.49
GABPAQ06546 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.74□□□□□ -1.49
GABPAQ06546 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
GABPAQ06546 AC112184.1-201ENST00000505179 312 ntBASIC5.74□□□□□ -1.49
GABPAQ06546 AL049839.1-201ENST00000556151 657 ntBASIC5.74□□□□□ -1.49
GABPAQ06546 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
GABPAQ06546 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.74□□□□□ -1.49
GABPAQ06546 AP000919.1-201ENST00000582850 985 ntBASIC5.74□□□□□ -1.49
GABPAQ06546 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.74□□□□□ -1.49
GABPAQ06546 AC087468.1-201ENST00000604365 630 ntBASIC5.74□□□□□ -1.49
GABPAQ06546 AC019206.1-201ENST00000621938 425 ntBASIC5.74□□□□□ -1.49
GABPAQ06546 Z95331.1-201ENST00000623075 23112 ntBASIC5.74□□□□□ -1.49
GABPAQ06546 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.74□□□□□ -1.49
GABPAQ06546 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GABPAQ06546 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.74□□□□□ -1.49
GABPAQ06546 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GABPAQ06546 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.73□□□□□ -1.49
GABPAQ06546 AC112198.2-201ENST00000426589 6996 ntBASIC5.73□□□□□ -1.49
GABPAQ06546 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
GABPAQ06546 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.73□□□□□ -1.49
GABPAQ06546 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
GABPAQ06546 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
GABPAQ06546 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
GABPAQ06546 AC079809.1-201ENST00000415468 276 ntBASIC5.73□□□□□ -1.49
GABPAQ06546 AC017078.1-201ENST00000416146 368 ntBASIC5.73□□□□□ -1.49
GABPAQ06546 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.73□□□□□ -1.49
GABPAQ06546 AC073052.1-201ENST00000440417 714 ntBASIC5.73□□□□□ -1.49
GABPAQ06546 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.73□□□□□ -1.49
GABPAQ06546 SEPT14P1-201ENST00000458703 648 ntBASIC5.73□□□□□ -1.49
GABPAQ06546 CR383656.1-201ENST00000484916 377 ntBASIC5.73□□□□□ -1.49
GABPAQ06546 RN7SL205P-201ENST00000490174 284 ntBASIC5.73□□□□□ -1.49
GABPAQ06546 AC093890.1-201ENST00000502554 540 ntBASIC5.73□□□□□ -1.49
GABPAQ06546 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.73□□□□□ -1.49
GABPAQ06546 AC092593.2-201ENST00000513866 913 ntBASIC5.73□□□□□ -1.49
GABPAQ06546 HIGD1AP5-201ENST00000529959 259 ntBASIC5.73□□□□□ -1.49
GABPAQ06546 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.73□□□□□ -1.49
GABPAQ06546 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.73□□□□□ -1.49
GABPAQ06546 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.73□□□□□ -1.49
GABPAQ06546 RN7SL52P-201ENST00000584271 284 ntBASIC5.73□□□□□ -1.49
GABPAQ06546 AC068790.4-201ENST00000602474 263 ntBASIC5.73□□□□□ -1.49
GABPAQ06546 AC098935.2-201ENST00000604222 466 ntBASIC5.73□□□□□ -1.49
GABPAQ06546 AL022394.1-201ENST00000606979 292 ntBASIC5.73□□□□□ -1.49
GABPAQ06546 RN7SL722P-201ENST00000617780 284 ntBASIC5.73□□□□□ -1.49
GABPAQ06546 RN7SL565P-201ENST00000618246 284 ntBASIC5.73□□□□□ -1.49
GABPAQ06546 MIR6853-201ENST00000619642 74 ntBASIC5.73□□□□□ -1.49
GABPAQ06546 AC243960.7-201ENST00000623532 707 ntBASIC5.73□□□□□ -1.49
GABPAQ06546 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.73□□□□□ -1.49
GABPAQ06546 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
GABPAQ06546 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.73□□□□□ -1.49
GABPAQ06546 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
GABPAQ06546 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
GABPAQ06546 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
GABPAQ06546 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.73□□□□□ -1.49
GABPAQ06546 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
GABPAQ06546 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
GABPAQ06546 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GABPAQ06546 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
GABPAQ06546 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
GABPAQ06546 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
GABPAQ06546 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
GABPAQ06546 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
GABPAQ06546 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
GABPAQ06546 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.72□□□□□ -1.49
GABPAQ06546 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.72□□□□□ -1.49
GABPAQ06546 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.72□□□□□ -1.49
GABPAQ06546 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
GABPAQ06546 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
GABPAQ06546 RPS4XP9-201ENST00000405151 780 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms