Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.45□□□□□ -1.7
H3F3AP84243 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.45□□□□□ -1.7
H3F3AP84243 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.45□□□□□ -1.7
H3F3AP84243 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
H3F3AP84243 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
H3F3AP84243 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.45□□□□□ -1.7
H3F3AP84243 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC4.45□□□□□ -1.7
H3F3AP84243 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.45□□□□□ -1.7
H3F3AP84243 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.45□□□□□ -1.7
H3F3AP84243 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.45□□□□□ -1.7
H3F3AP84243 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.45□□□□□ -1.7
H3F3AP84243 AC004453.1-201ENST00000487895 408 ntBASIC4.45□□□□□ -1.7
H3F3AP84243 AC112184.1-201ENST00000505179 312 ntBASIC4.45□□□□□ -1.7
H3F3AP84243 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.45□□□□□ -1.7
H3F3AP84243 AP006245.2-201ENST00000522004 300 ntBASIC4.45□□□□□ -1.7
H3F3AP84243 OR10D4P-201ENST00000525892 951 ntBASIC4.45□□□□□ -1.7
H3F3AP84243 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.45□□□□□ -1.7
H3F3AP84243 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.45□□□□□ -1.7
H3F3AP84243 TVP23CP2-201ENST00000571473 623 ntBASIC4.45□□□□□ -1.7
H3F3AP84243 RN7SL435P-201ENST00000584418 282 ntBASIC4.45□□□□□ -1.7
H3F3AP84243 AC013244.1-201ENST00000604279 193 ntBASIC4.45□□□□□ -1.7
H3F3AP84243 AC104687.2-201ENST00000604442 342 ntBASIC4.45□□□□□ -1.7
H3F3AP84243 AL356752.1-201ENST00000615844 593 ntBASIC4.45□□□□□ -1.7
H3F3AP84243 AL049794.2-201ENST00000616301 365 ntBASIC4.45□□□□□ -1.7
H3F3AP84243 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.45□□□□□ -1.7
H3F3AP84243 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.45□□□□□ -1.7
H3F3AP84243 AC073869.10-201ENST00000642016 354 ntBASIC4.45□□□□□ -1.7
H3F3AP84243 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
H3F3AP84243 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
H3F3AP84243 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.45□□□□□ -1.7
H3F3AP84243 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
H3F3AP84243 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
H3F3AP84243 MAPK10-286ENST00000641208 8747 ntBASIC4.45□□□□□ -1.7
H3F3AP84243 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
H3F3AP84243 SOCS5P3-201ENST00000425115 1576 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 AC063976.2-201ENST00000425667 3556 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
H3F3AP84243 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
H3F3AP84243 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
H3F3AP84243 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
H3F3AP84243 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
H3F3AP84243 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.44□□□□□ -1.7
H3F3AP84243 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
H3F3AP84243 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.44□□□□□ -1.7
H3F3AP84243 SNORA70-201ENST00000384436 135 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 SNORA70.10-201ENST00000384515 134 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
H3F3AP84243 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
H3F3AP84243 AL645927.1-201ENST00000396783 406 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.44□□□□□ -1.7
H3F3AP84243 AP002530.1-201ENST00000405705 684 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 MIR1271-201ENST00000408537 86 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 SNORA79B-201ENST00000410557 148 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.44□□□□□ -1.7
H3F3AP84243 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.44□□□□□ -1.7
H3F3AP84243 QRSL1P2-201ENST00000418582 964 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.44□□□□□ -1.7
H3F3AP84243 AC104333.2-201ENST00000422630 192 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.44□□□□□ -1.7
H3F3AP84243 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.44□□□□□ -1.7
H3F3AP84243 PSMD10P3-201ENST00000437000 448 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.44□□□□□ -1.7
H3F3AP84243 AL137845.2-201ENST00000444292 988 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.44□□□□□ -1.7
H3F3AP84243 RN7SL517P-201ENST00000462240 305 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 RN7SL319P-201ENST00000480656 221 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.44□□□□□ -1.7
H3F3AP84243 OR11I1P-201ENST00000486033 954 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 RN7SL97P-201ENST00000486780 299 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 OR2A3P-201ENST00000493774 953 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 RN7SL808P-201ENST00000496066 299 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 AC140172.1-201ENST00000502928 141 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 OR5M14P-201ENST00000506803 618 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 MRPS33P2-201ENST00000507850 322 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 AC147055.3-201ENST00000510547 851 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 EIF4A2P5-201ENST00000529914 499 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 BNIP3P1-201ENST00000547295 580 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 AC016180.1-201ENST00000567945 403 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 AC011840.5-201ENST00000582125 771 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 EIF1P5-201ENST00000585002 234 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 AC087783.2-201ENST00000605070 562 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 AP001521.2-201ENST00000608772 546 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 EIF3FP1-201ENST00000613970 806 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 AC037198.3-201ENST00000616754 526 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 AC091905.4-201ENST00000623432 202 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.44□□□□□ -1.7
H3F3AP84243 AC068446.1-201ENST00000556425 1549 ntBASIC4.44□□□□□ -1.7
H3F3AP84243 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.44□□□□□ -1.7
H3F3AP84243 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.44□□□□□ -1.7
H3F3AP84243 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.44□□□□□ -1.7
H3F3AP84243 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.44□□□□□ -1.7
H3F3AP84243 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
H3F3AP84243 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
H3F3AP84243 SCARNA15-201ENST00000607520 4325 ntBASIC4.43□□□□□ -1.7
H3F3AP84243 CDY3P-201ENST00000454543 1618 ntBASIC4.43□□□□□ -1.7
H3F3AP84243 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
H3F3AP84243 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
H3F3AP84243 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.43□□□□□ -1.7
H3F3AP84243 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.43□□□□□ -1.7
H3F3AP84243 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 160.9 ms