Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.32□□□□□ -1.88
RPL39P62891 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
RPL39P62891 AC000123.3-201ENST00000624029 4975 ntBASIC3.31□□□□□ -1.88
RPL39P62891 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
RPL39P62891 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
RPL39P62891 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RPL39P62891 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RPL39P62891 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RPL39P62891 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RPL39P62891 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
RPL39P62891 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.31□□□□□ -1.88
RPL39P62891 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.31□□□□□ -1.88
RPL39P62891 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RPL39P62891 NXF4-202ENST00000416098 1465 ntBASIC3.31□□□□□ -1.88
RPL39P62891 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
RPL39P62891 RNA5SP28-201ENST00000363841 119 ntBASIC3.31□□□□□ -1.88
RPL39P62891 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RPL39P62891 MORN2-202ENST00000409077 465 ntTSL 5 BASIC3.31□□□□□ -1.88
RPL39P62891 RN7SKP59-201ENST00000410520 314 ntBASIC3.31□□□□□ -1.88
RPL39P62891 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC3.31□□□□□ -1.88
RPL39P62891 AL163193.1-201ENST00000444895 788 ntBASIC3.31□□□□□ -1.88
RPL39P62891 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC3.31□□□□□ -1.88
RPL39P62891 RPL7AP28-201ENST00000464513 571 ntBASIC3.31□□□□□ -1.88
RPL39P62891 NDUFA5P5-201ENST00000468361 342 ntBASIC3.31□□□□□ -1.88
RPL39P62891 AC094085.1-201ENST00000468914 584 ntBASIC3.31□□□□□ -1.88
RPL39P62891 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC3.31□□□□□ -1.88
RPL39P62891 RPS4XP1-201ENST00000482189 787 ntBASIC3.31□□□□□ -1.88
RPL39P62891 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RPL39P62891 AC012158.1-204ENST00000483430 465 ntBASIC3.31□□□□□ -1.88
RPL39P62891 RN7SL214P-201ENST00000487317 265 ntBASIC3.31□□□□□ -1.88
RPL39P62891 RN7SL244P-201ENST00000493405 297 ntBASIC3.31□□□□□ -1.88
RPL39P62891 AC108022.1-201ENST00000493466 478 ntBASIC3.31□□□□□ -1.88
RPL39P62891 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC3.31□□□□□ -1.88
RPL39P62891 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC3.31□□□□□ -1.88
RPL39P62891 RNA5SP392-201ENST00000516905 112 ntBASIC3.31□□□□□ -1.88
RPL39P62891 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC3.31□□□□□ -1.88
RPL39P62891 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC3.31□□□□□ -1.88
RPL39P62891 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC3.31□□□□□ -1.88
RPL39P62891 BMPR1APS2-201ENST00000527904 1012 ntBASIC3.31□□□□□ -1.88
RPL39P62891 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC3.31□□□□□ -1.88
RPL39P62891 AC005363.1-201ENST00000530779 351 ntBASIC3.31□□□□□ -1.88
RPL39P62891 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC3.31□□□□□ -1.88
RPL39P62891 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.31□□□□□ -1.88
RPL39P62891 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RPL39P62891 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RPL39P62891 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.31□□□□□ -1.88
RPL39P62891 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.31□□□□□ -1.88
RPL39P62891 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC3.31□□□□□ -1.88
RPL39P62891 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC3.31□□□□□ -1.88
RPL39P62891 AC009779.8-202ENST00000607990 932 ntBASIC3.31□□□□□ -1.88
RPL39P62891 AL356752.1-201ENST00000615844 593 ntBASIC3.31□□□□□ -1.88
RPL39P62891 AL359742.1-201ENST00000622497 540 ntBASIC3.31□□□□□ -1.88
RPL39P62891 AC011815.3-201ENST00000624194 473 ntBASIC3.31□□□□□ -1.88
RPL39P62891 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
RPL39P62891 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
RPL39P62891 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RPL39P62891 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
RPL39P62891 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.31□□□□□ -1.88
RPL39P62891 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RPL39P62891 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.3□□□□□ -1.88
RPL39P62891 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RPL39P62891 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.3□□□□□ -1.88
RPL39P62891 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
RPL39P62891 AC091046.3-201ENST00000631455 1574 ntBASIC3.3□□□□□ -1.88
RPL39P62891 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RPL39P62891 EEF1A1P36-201ENST00000427807 1351 ntBASIC3.3□□□□□ -1.88
RPL39P62891 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RPL39P62891 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RPL39P62891 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RPL39P62891 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
RPL39P62891 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RPL39P62891 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RPL39P62891 RNA5SP455-201ENST00000365190 119 ntBASIC3.3□□□□□ -1.88
RPL39P62891 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC3.3□□□□□ -1.88
RPL39P62891 AL589647.1-201ENST00000402485 466 ntBASIC3.3□□□□□ -1.88
RPL39P62891 VN1R12P-201ENST00000403778 876 ntBASIC3.3□□□□□ -1.88
RPL39P62891 AL139039.2-201ENST00000407436 479 ntBASIC3.3□□□□□ -1.88
RPL39P62891 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.3□□□□□ -1.88
RPL39P62891 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC3.3□□□□□ -1.88
RPL39P62891 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC3.3□□□□□ -1.88
RPL39P62891 BMS1P13-201ENST00000417301 885 ntBASIC3.3□□□□□ -1.88
RPL39P62891 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC3.3□□□□□ -1.88
RPL39P62891 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC3.3□□□□□ -1.88
RPL39P62891 AL161636.2-201ENST00000445179 927 ntBASIC3.3□□□□□ -1.88
RPL39P62891 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.3□□□□□ -1.88
RPL39P62891 NDUFA5P8-201ENST00000449019 346 ntBASIC3.3□□□□□ -1.88
RPL39P62891 RPL31P15-201ENST00000449770 338 ntBASIC3.3□□□□□ -1.88
RPL39P62891 RN7SL168P-201ENST00000463821 279 ntBASIC3.3□□□□□ -1.88
RPL39P62891 AC097484.1-201ENST00000471148 389 ntBASIC3.3□□□□□ -1.88
RPL39P62891 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RPL39P62891 RPL23AP65-201ENST00000475608 468 ntBASIC3.3□□□□□ -1.88
RPL39P62891 RN7SL319P-201ENST00000480656 221 ntBASIC3.3□□□□□ -1.88
RPL39P62891 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC3.3□□□□□ -1.88
RPL39P62891 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RPL39P62891 PGAM1P13-201ENST00000507497 754 ntBASIC3.3□□□□□ -1.88
RPL39P62891 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC3.3□□□□□ -1.88
RPL39P62891 BX510359.5-201ENST00000515651 304 ntBASIC3.3□□□□□ -1.88
RPL39P62891 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC3.3□□□□□ -1.88
RPL39P62891 IGLV3-26-201ENST00000520756 302 ntBASIC3.3□□□□□ -1.88
RPL39P62891 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms