Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.44□□□□□ -1.54
CLRN1P58418 RPL23AP60-201ENST00000450011 454 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.44□□□□□ -1.54
CLRN1P58418 OR52J1P-201ENST00000450596 932 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CLRN1P58418 DNAJC19P8-201ENST00000452887 259 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.44□□□□□ -1.54
CLRN1P58418 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.44□□□□□ -1.54
CLRN1P58418 AC084754.1-201ENST00000463466 464 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 SLC25A51P1-201ENST00000468432 871 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.44□□□□□ -1.54
CLRN1P58418 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.44□□□□□ -1.54
CLRN1P58418 RPL30P6-201ENST00000475925 342 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 RPL7P40-201ENST00000481703 745 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 AC092045.1-201ENST00000495716 1231 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 ECM1P2-201ENST00000503354 1577 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.44□□□□□ -1.54
CLRN1P58418 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CLRN1P58418 AC087359.1-201ENST00000508335 1740 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.44□□□□□ -1.54
CLRN1P58418 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.44□□□□□ -1.54
CLRN1P58418 ZNF519P4-201ENST00000514008 125 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 MTCO2P32-201ENST00000514865 403 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 AC105185.1-201ENST00000518705 535 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.44□□□□□ -1.54
CLRN1P58418 AC020937.1-201ENST00000519677 1013 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.44□□□□□ -1.54
CLRN1P58418 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.44□□□□□ -1.54
CLRN1P58418 AP001000.1-201ENST00000526843 742 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.44□□□□□ -1.54
CLRN1P58418 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.44□□□□□ -1.54
CLRN1P58418 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.44□□□□□ -1.54
CLRN1P58418 AL121766.1-201ENST00000547436 487 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.44□□□□□ -1.54
CLRN1P58418 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLRN1P58418 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.44□□□□□ -1.54
CLRN1P58418 GLYATL1P2-202ENST00000588046 902 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 AC004987.4-201ENST00000603383 338 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.44□□□□□ -1.54
CLRN1P58418 AC092653.1-201ENST00000608509 531 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 AL451074.6-201ENST00000608512 729 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 AC007786.3-201ENST00000615154 596 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 AL158063.1-201ENST00000615349 536 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 HTR1DP1-201ENST00000616500 888 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 RFPL4AP6-201ENST00000616792 846 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
CLRN1P58418 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.44□□□□□ -1.54
CLRN1P58418 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.44□□□□□ -1.54
CLRN1P58418 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.44□□□□□ -1.54
CLRN1P58418 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.44□□□□□ -1.54
CLRN1P58418 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLRN1P58418 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CLRN1P58418 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CLRN1P58418 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.44□□□□□ -1.54
CLRN1P58418 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLRN1P58418 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.43□□□□□ -1.54
CLRN1P58418 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.43□□□□□ -1.54
CLRN1P58418 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLRN1P58418 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CLRN1P58418 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.43□□□□□ -1.54
CLRN1P58418 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLRN1P58418 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CLRN1P58418 MTCO1P6-201ENST00000481192 1384 ntBASIC5.43□□□□□ -1.54
CLRN1P58418 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.43□□□□□ -1.54
CLRN1P58418 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CLRN1P58418 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLRN1P58418 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLRN1P58418 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
CLRN1P58418 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CLRN1P58418 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CLRN1P58418 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CLRN1P58418 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CLRN1P58418 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLRN1P58418 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLRN1P58418 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLRN1P58418 AC092104.1-201ENST00000497346 1441 ntBASIC5.43□□□□□ -1.54
CLRN1P58418 ZNF402P-201ENST00000404435 3100 ntBASIC5.43□□□□□ -1.54
CLRN1P58418 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.43□□□□□ -1.54
CLRN1P58418 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.43□□□□□ -1.54
CLRN1P58418 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.43□□□□□ -1.54
CLRN1P58418 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLRN1P58418 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CLRN1P58418 RPL23AP17-201ENST00000401064 499 ntBASIC5.43□□□□□ -1.54
CLRN1P58418 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.43□□□□□ -1.54
CLRN1P58418 AC015977.1-201ENST00000418887 292 ntBASIC5.43□□□□□ -1.54
CLRN1P58418 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.43□□□□□ -1.54
CLRN1P58418 AC007435.1-201ENST00000421086 415 ntBASIC5.43□□□□□ -1.54
CLRN1P58418 AC066692.1-201ENST00000421721 457 ntBASIC5.43□□□□□ -1.54
CLRN1P58418 OR6K4P-201ENST00000423179 955 ntBASIC5.43□□□□□ -1.54
CLRN1P58418 AC244035.1-201ENST00000430042 390 ntBASIC5.43□□□□□ -1.54
CLRN1P58418 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.43□□□□□ -1.54
CLRN1P58418 AL731534.1-201ENST00000434711 269 ntBASIC5.43□□□□□ -1.54
CLRN1P58418 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.43□□□□□ -1.54
CLRN1P58418 HMGB1P16-201ENST00000447155 540 ntBASIC5.43□□□□□ -1.54
CLRN1P58418 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC5.43□□□□□ -1.54
CLRN1P58418 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.43□□□□□ -1.54
CLRN1P58418 RPL7P18-201ENST00000478965 734 ntBASIC5.43□□□□□ -1.54
CLRN1P58418 AC104687.1-201ENST00000485829 412 ntBASIC5.43□□□□□ -1.54
CLRN1P58418 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.43□□□□□ -1.54
CLRN1P58418 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms