Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.01□□□□□ -1.61
SOX2P48431 AC005244.1-201ENST00000582566 339 ntBASIC5.01□□□□□ -1.61
SOX2P48431 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.01□□□□□ -1.61
SOX2P48431 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.01□□□□□ -1.61
SOX2P48431 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SOX2P48431 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SOX2P48431 AC091057.2-201ENST00000602594 792 ntBASIC5.01□□□□□ -1.61
SOX2P48431 WBP1LP12-201ENST00000604449 331 ntBASIC5.01□□□□□ -1.61
SOX2P48431 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SOX2P48431 NANOGP3-201ENST00000605855 286 ntBASIC5.01□□□□□ -1.61
SOX2P48431 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.01□□□□□ -1.61
SOX2P48431 AL451049.1-201ENST00000608672 497 ntBASIC5.01□□□□□ -1.61
SOX2P48431 AL445423.1-201ENST00000609941 536 ntBASIC5.01□□□□□ -1.61
SOX2P48431 AC009237.15-201ENST00000610252 501 ntBASIC5.01□□□□□ -1.61
SOX2P48431 Z95327.3-201ENST00000610385 572 ntBASIC5.01□□□□□ -1.61
SOX2P48431 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.01□□□□□ -1.61
SOX2P48431 AC011472.4-201ENST00000615848 491 ntBASIC5.01□□□□□ -1.61
SOX2P48431 FAM27E2-201ENST00000619668 403 ntBASIC5.01□□□□□ -1.61
SOX2P48431 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SOX2P48431 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.01□□□□□ -1.61
SOX2P48431 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.01□□□□□ -1.61
SOX2P48431 AC068870.3-201ENST00000625077 2536 ntBASIC5.01□□□□□ -1.61
SOX2P48431 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SOX2P48431 LINC02019-201ENST00000608605 2060 ntBASIC5.01□□□□□ -1.61
SOX2P48431 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
SOX2P48431 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SOX2P48431 SEC63P2-201ENST00000503863 1939 ntBASIC5.01□□□□□ -1.61
SOX2P48431 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SOX2P48431 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SOX2P48431 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SOX2P48431 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SOX2P48431 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SOX2P48431 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
SOX2P48431 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5□□□□□ -1.61
SOX2P48431 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5□□□□□ -1.61
SOX2P48431 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
SOX2P48431 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5□□□□□ -1.61
SOX2P48431 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5□□□□□ -1.61
SOX2P48431 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
SOX2P48431 AC068870.1-201ENST00000563737 2455 ntBASIC5□□□□□ -1.61
SOX2P48431 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SOX2P48431 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5□□□□□ -1.61
SOX2P48431 CDC27P2-201ENST00000425026 1922 ntBASIC5□□□□□ -1.61
SOX2P48431 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SOX2P48431 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SOX2P48431 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SOX2P48431 AC017079.1-201ENST00000333650 415 ntBASIC5□□□□□ -1.61
SOX2P48431 RNA5SP326-201ENST00000363209 110 ntBASIC5□□□□□ -1.61
SOX2P48431 RNA5SP279-201ENST00000365513 117 ntBASIC5□□□□□ -1.61
SOX2P48431 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
SOX2P48431 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5□□□□□ -1.61
SOX2P48431 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5□□□□□ -1.61
SOX2P48431 RNU6-532P-201ENST00000384318 107 ntBASIC5□□□□□ -1.61
SOX2P48431 SNORD116-8-201ENST00000384365 95 ntBASIC5□□□□□ -1.61
SOX2P48431 RNU6-549P-201ENST00000384433 107 ntBASIC5□□□□□ -1.61
SOX2P48431 U3.28-201ENST00000391249 210 ntBASIC5□□□□□ -1.61
SOX2P48431 RPS27AP11-201ENST00000402798 447 ntBASIC5□□□□□ -1.61
SOX2P48431 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5□□□□□ -1.61
SOX2P48431 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SOX2P48431 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5□□□□□ -1.61
SOX2P48431 TAF13P2-201ENST00000416876 286 ntBASIC5□□□□□ -1.61
SOX2P48431 AC234781.4-201ENST00000419384 244 ntBASIC5□□□□□ -1.61
SOX2P48431 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5□□□□□ -1.61
SOX2P48431 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5□□□□□ -1.61
SOX2P48431 C1DP1-201ENST00000426049 402 ntBASIC5□□□□□ -1.61
SOX2P48431 DPY19L1P2-201ENST00000426647 915 ntBASIC5□□□□□ -1.61
SOX2P48431 TXNL1P1-201ENST00000429528 554 ntBASIC5□□□□□ -1.61
SOX2P48431 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5□□□□□ -1.61
SOX2P48431 AC068135.1-201ENST00000446164 246 ntBASIC5□□□□□ -1.61
SOX2P48431 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5□□□□□ -1.61
SOX2P48431 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5□□□□□ -1.61
SOX2P48431 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5□□□□□ -1.61
SOX2P48431 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
SOX2P48431 RPL23AP44-201ENST00000482216 473 ntBASIC5□□□□□ -1.61
SOX2P48431 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5□□□□□ -1.61
SOX2P48431 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5□□□□□ -1.61
SOX2P48431 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5□□□□□ -1.61
SOX2P48431 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5□□□□□ -1.61
SOX2P48431 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5□□□□□ -1.61
SOX2P48431 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5□□□□□ -1.61
SOX2P48431 AC092593.2-201ENST00000513866 913 ntBASIC5□□□□□ -1.61
SOX2P48431 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5□□□□□ -1.61
SOX2P48431 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SOX2P48431 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5□□□□□ -1.61
SOX2P48431 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5□□□□□ -1.61
SOX2P48431 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5□□□□□ -1.61
SOX2P48431 AC135279.1-201ENST00000543493 504 ntBASIC5□□□□□ -1.61
SOX2P48431 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5□□□□□ -1.61
SOX2P48431 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5□□□□□ -1.61
SOX2P48431 MIR4701-201ENST00000583094 63 ntBASIC5□□□□□ -1.61
SOX2P48431 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5□□□□□ -1.61
SOX2P48431 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5□□□□□ -1.61
SOX2P48431 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5□□□□□ -1.61
SOX2P48431 AC018809.2-201ENST00000602436 3823 ntBASIC5□□□□□ -1.61
SOX2P48431 Z94722.1-201ENST00000604328 474 ntBASIC5□□□□□ -1.61
SOX2P48431 AC016877.3-201ENST00000606778 504 ntBASIC5□□□□□ -1.61
SOX2P48431 AC064807.4-201ENST00000607201 407 ntBASIC5□□□□□ -1.61
SOX2P48431 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5□□□□□ -1.61
SOX2P48431 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5□□□□□ -1.61
SOX2P48431 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms