Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC104763.3-201ENST00000613765 618 ntBASIC5.53□□□□□ -1.52
PTPN9P43378 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.53□□□□□ -1.52
PTPN9P43378 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.53□□□□□ -1.52
PTPN9P43378 FRG1DP-201ENST00000635586 771 ntBASIC5.53□□□□□ -1.52
PTPN9P43378 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
PTPN9P43378 MIR4302-201ENST00000638058 60 ntBASIC5.53□□□□□ -1.52
PTPN9P43378 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.53□□□□□ -1.52
PTPN9P43378 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTPN9P43378 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTPN9P43378 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
PTPN9P43378 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.53□□□□□ -1.52
PTPN9P43378 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
PTPN9P43378 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.53□□□□□ -1.52
PTPN9P43378 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.53□□□□□ -1.52
PTPN9P43378 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PTPN9P43378 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTPN9P43378 PROS2P-201ENST00000474651 1951 ntBASIC5.53□□□□□ -1.52
PTPN9P43378 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
PTPN9P43378 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.53□□□□□ -1.52
PTPN9P43378 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN9P43378 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN9P43378 AC023421.1-201ENST00000590535 1785 ntBASIC5.52□□□□□ -1.53
PTPN9P43378 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.52□□□□□ -1.53
PTPN9P43378 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN9P43378 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN9P43378 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN9P43378 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN9P43378 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.52□□□□□ -1.53
PTPN9P43378 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN9P43378 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN9P43378 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.52□□□□□ -1.53
PTPN9P43378 MIR589-201ENST00000385238 99 ntBASIC5.52□□□□□ -1.53
PTPN9P43378 RNU1-149P-201ENST00000390870 161 ntBASIC5.52□□□□□ -1.53
PTPN9P43378 RNA5SP105-201ENST00000391123 113 ntBASIC5.52□□□□□ -1.53
PTPN9P43378 AL121878.1-201ENST00000418638 859 ntBASIC5.52□□□□□ -1.53
PTPN9P43378 RPS26P13-201ENST00000419030 330 ntBASIC5.52□□□□□ -1.53
PTPN9P43378 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN9P43378 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.52□□□□□ -1.53
PTPN9P43378 FAM96AP1-201ENST00000430879 482 ntBASIC5.52□□□□□ -1.53
PTPN9P43378 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.52□□□□□ -1.53
PTPN9P43378 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN9P43378 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN9P43378 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN9P43378 CLIC4P1-201ENST00000453177 535 ntBASIC5.52□□□□□ -1.53
PTPN9P43378 AC011225.1-201ENST00000457751 369 ntBASIC5.52□□□□□ -1.53
PTPN9P43378 SIAH1P1-201ENST00000479411 923 ntBASIC5.52□□□□□ -1.53
PTPN9P43378 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN9P43378 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.52□□□□□ -1.53
PTPN9P43378 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.52□□□□□ -1.53
PTPN9P43378 RNU6-334P-201ENST00000517072 102 ntBASIC5.52□□□□□ -1.53
PTPN9P43378 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN9P43378 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.52□□□□□ -1.53
PTPN9P43378 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.52□□□□□ -1.53
PTPN9P43378 IGKV2-18-201ENST00000522607 343 ntBASIC5.52□□□□□ -1.53
PTPN9P43378 AC004923.2-201ENST00000529649 369 ntBASIC5.52□□□□□ -1.53
PTPN9P43378 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.52□□□□□ -1.53
PTPN9P43378 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.52□□□□□ -1.53
PTPN9P43378 AC027369.5-201ENST00000533838 755 ntBASIC5.52□□□□□ -1.53
PTPN9P43378 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.52□□□□□ -1.53
PTPN9P43378 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.52□□□□□ -1.53
PTPN9P43378 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.52□□□□□ -1.53
PTPN9P43378 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.52□□□□□ -1.53
PTPN9P43378 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.52□□□□□ -1.53
PTPN9P43378 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.52□□□□□ -1.53
PTPN9P43378 AC009852.2-201ENST00000567898 485 ntBASIC5.52□□□□□ -1.53
PTPN9P43378 MTCYBP13-201ENST00000578634 1093 ntBASIC5.52□□□□□ -1.53
PTPN9P43378 AC090330.1-201ENST00000588646 764 ntBASIC5.52□□□□□ -1.53
PTPN9P43378 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.52□□□□□ -1.53
PTPN9P43378 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.52□□□□□ -1.53
PTPN9P43378 AF230666.2-201ENST00000602328 725 ntBASIC5.52□□□□□ -1.53
PTPN9P43378 AC008814.1-201ENST00000603797 406 ntBASIC5.52□□□□□ -1.53
PTPN9P43378 MIR6837-201ENST00000620884 64 ntBASIC5.52□□□□□ -1.53
PTPN9P43378 AC092159.4-201ENST00000624944 550 ntBASIC5.52□□□□□ -1.53
PTPN9P43378 AC136428.4-201ENST00000634254 1155 ntBASIC5.52□□□□□ -1.53
PTPN9P43378 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.52□□□□□ -1.53
PTPN9P43378 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.52□□□□□ -1.53
PTPN9P43378 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
PTPN9P43378 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
PTPN9P43378 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.52□□□□□ -1.53
PTPN9P43378 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.52□□□□□ -1.53
PTPN9P43378 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN9P43378 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN9P43378 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN9P43378 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
PTPN9P43378 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN9P43378 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN9P43378 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN9P43378 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.51□□□□□ -1.53
PTPN9P43378 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN9P43378 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
PTPN9P43378 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN9P43378 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
PTPN9P43378 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.51□□□□□ -1.53
PTPN9P43378 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PTPN9P43378 RN7SKP162-201ENST00000363605 345 ntBASIC5.51□□□□□ -1.53
PTPN9P43378 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN9P43378 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN9P43378 MIR105-1-201ENST00000385222 81 ntBASIC5.51□□□□□ -1.53
PTPN9P43378 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.51□□□□□ -1.53
PTPN9P43378 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms