Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 Y_RNA.719-201ENST00000517156 106 ntBASIC5.06□□□□□ -1.6
FDFT1P37268 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.06□□□□□ -1.6
FDFT1P37268 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
FDFT1P37268 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.06□□□□□ -1.6
FDFT1P37268 OR7E128P-201ENST00000532736 1024 ntBASIC5.06□□□□□ -1.6
FDFT1P37268 AC004825.1-201ENST00000555068 586 ntBASIC5.06□□□□□ -1.6
FDFT1P37268 AL121839.1-201ENST00000556233 1185 ntBASIC5.06□□□□□ -1.6
FDFT1P37268 AL390334.1-201ENST00000556395 450 ntBASIC5.06□□□□□ -1.6
FDFT1P37268 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
FDFT1P37268 CYCSP40-201ENST00000575927 294 ntBASIC5.06□□□□□ -1.6
FDFT1P37268 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.06□□□□□ -1.6
FDFT1P37268 EIF1P5-201ENST00000585002 234 ntBASIC5.06□□□□□ -1.6
FDFT1P37268 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.06□□□□□ -1.6
FDFT1P37268 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.06□□□□□ -1.6
FDFT1P37268 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.06□□□□□ -1.6
FDFT1P37268 AC138627.1-204ENST00000641894 765 ntBASIC5.06□□□□□ -1.6
FDFT1P37268 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
FDFT1P37268 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
FDFT1P37268 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
FDFT1P37268 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
FDFT1P37268 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
FDFT1P37268 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
FDFT1P37268 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
FDFT1P37268 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
FDFT1P37268 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
FDFT1P37268 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
FDFT1P37268 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.05□□□□□ -1.6
FDFT1P37268 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
FDFT1P37268 DDX18P5-201ENST00000534547 1306 ntBASIC5.05□□□□□ -1.6
FDFT1P37268 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
FDFT1P37268 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
FDFT1P37268 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.05□□□□□ -1.6
FDFT1P37268 U3.36-201ENST00000408418 213 ntBASIC5.05□□□□□ -1.6
FDFT1P37268 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.05□□□□□ -1.6
FDFT1P37268 OR6C64P-201ENST00000419708 825 ntBASIC5.05□□□□□ -1.6
FDFT1P37268 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.05□□□□□ -1.6
FDFT1P37268 SCAND3P1-201ENST00000439854 1060 ntBASIC5.05□□□□□ -1.6
FDFT1P37268 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
FDFT1P37268 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.05□□□□□ -1.6
FDFT1P37268 RN7SL172P-201ENST00000460535 303 ntBASIC5.05□□□□□ -1.6
FDFT1P37268 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
FDFT1P37268 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.05□□□□□ -1.6
FDFT1P37268 HMGN2P25-201ENST00000486956 268 ntBASIC5.05□□□□□ -1.6
FDFT1P37268 COX6B1P5-201ENST00000509843 249 ntBASIC5.05□□□□□ -1.6
FDFT1P37268 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.05□□□□□ -1.6
FDFT1P37268 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.05□□□□□ -1.6
FDFT1P37268 AP001804.2-201ENST00000533932 910 ntBASIC5.05□□□□□ -1.6
FDFT1P37268 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.05□□□□□ -1.6
FDFT1P37268 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.05□□□□□ -1.6
FDFT1P37268 MIR4310-201ENST00000582950 57 ntBASIC5.05□□□□□ -1.6
FDFT1P37268 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.05□□□□□ -1.6
FDFT1P37268 AC005377.1-201ENST00000605126 456 ntBASIC5.05□□□□□ -1.6
FDFT1P37268 AP000864.1-201ENST00000609424 650 ntBASIC5.05□□□□□ -1.6
FDFT1P37268 AL139407.1-201ENST00000613826 1175 ntBASIC5.05□□□□□ -1.6
FDFT1P37268 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.05□□□□□ -1.6
FDFT1P37268 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.05□□□□□ -1.6
FDFT1P37268 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.05□□□□□ -1.6
FDFT1P37268 THAP12P4-201ENST00000528321 2266 ntBASIC5.05□□□□□ -1.6
FDFT1P37268 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
FDFT1P37268 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
FDFT1P37268 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
FDFT1P37268 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.05□□□□□ -1.6
FDFT1P37268 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
FDFT1P37268 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.04□□□□□ -1.6
FDFT1P37268 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.04□□□□□ -1.6
FDFT1P37268 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
FDFT1P37268 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.04□□□□□ -1.6
FDFT1P37268 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
FDFT1P37268 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
FDFT1P37268 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.04□□□□□ -1.6
FDFT1P37268 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
FDFT1P37268 SNURFL-201ENST00000309296 343 ntBASIC5.04□□□□□ -1.6
FDFT1P37268 MIR223-201ENST00000385204 110 ntBASIC5.04□□□□□ -1.6
FDFT1P37268 RNU6-1320P-201ENST00000390838 107 ntBASIC5.04□□□□□ -1.6
FDFT1P37268 RNU6-1269P-201ENST00000391139 107 ntBASIC5.04□□□□□ -1.6
FDFT1P37268 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
FDFT1P37268 AC002524.1-201ENST00000411687 547 ntBASIC5.04□□□□□ -1.6
FDFT1P37268 RPL12P43-201ENST00000420608 499 ntBASIC5.04□□□□□ -1.6
FDFT1P37268 TRGV7-201ENST00000427089 353 ntBASIC5.04□□□□□ -1.6
FDFT1P37268 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.04□□□□□ -1.6
FDFT1P37268 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.04□□□□□ -1.6
FDFT1P37268 NPM1P33-201ENST00000438918 872 ntBASIC5.04□□□□□ -1.6
FDFT1P37268 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.04□□□□□ -1.6
FDFT1P37268 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.04□□□□□ -1.6
FDFT1P37268 RNU6-599P-201ENST00000459383 107 ntBASIC5.04□□□□□ -1.6
FDFT1P37268 RNU6-1193P-201ENST00000459461 107 ntBASIC5.04□□□□□ -1.6
FDFT1P37268 AC107015.1-201ENST00000466902 747 ntBASIC5.04□□□□□ -1.6
FDFT1P37268 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.04□□□□□ -1.6
FDFT1P37268 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FDFT1P37268 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.04□□□□□ -1.6
FDFT1P37268 AC090686.1-201ENST00000481577 749 ntBASIC5.04□□□□□ -1.6
FDFT1P37268 RN7SL30P-201ENST00000488416 306 ntBASIC5.04□□□□□ -1.6
FDFT1P37268 OR9N1P-201ENST00000491296 333 ntBASIC5.04□□□□□ -1.6
FDFT1P37268 RN7SL591P-201ENST00000496150 292 ntBASIC5.04□□□□□ -1.6
FDFT1P37268 AC072052.1-201ENST00000496556 306 ntBASIC5.04□□□□□ -1.6
FDFT1P37268 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.04□□□□□ -1.6
FDFT1P37268 AC106872.4-201ENST00000510050 523 ntBASIC5.04□□□□□ -1.6
FDFT1P37268 RPL7L1P4-201ENST00000513004 707 ntBASIC5.04□□□□□ -1.6
FDFT1P37268 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
FDFT1P37268 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms