Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXD13P35453 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HOXD13P35453 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXD13P35453 CASC19-284ENST00000642142 1868 ntBASIC5.64□□□□□ -1.51
HOXD13P35453 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXD13P35453 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HOXD13P35453 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
HOXD13P35453 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
HOXD13P35453 SNORA17.1-201ENST00000362945 126 ntBASIC5.64□□□□□ -1.51
HOXD13P35453 RNA5SP223-201ENST00000365174 120 ntBASIC5.64□□□□□ -1.51
HOXD13P35453 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXD13P35453 AC092642.1-201ENST00000392417 425 ntBASIC5.64□□□□□ -1.51
HOXD13P35453 MARK2P12-201ENST00000420129 585 ntBASIC5.64□□□□□ -1.51
HOXD13P35453 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXD13P35453 CYCSP11-201ENST00000436426 315 ntBASIC5.64□□□□□ -1.51
HOXD13P35453 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXD13P35453 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXD13P35453 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.64□□□□□ -1.51
HOXD13P35453 AC007000.2-201ENST00000442564 487 ntBASIC5.64□□□□□ -1.51
HOXD13P35453 AC022431.1-201ENST00000450941 438 ntBASIC5.64□□□□□ -1.51
HOXD13P35453 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.64□□□□□ -1.51
HOXD13P35453 AC092691.2-201ENST00000461787 803 ntBASIC5.64□□□□□ -1.51
HOXD13P35453 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.64□□□□□ -1.51
HOXD13P35453 AC021660.1-201ENST00000465006 554 ntBASIC5.64□□□□□ -1.51
HOXD13P35453 CABYRP1-201ENST00000465493 1045 ntBASIC5.64□□□□□ -1.51
HOXD13P35453 AC096741.1-201ENST00000472250 846 ntBASIC5.64□□□□□ -1.51
HOXD13P35453 RPL37AP8-201ENST00000494116 276 ntBASIC5.64□□□□□ -1.51
HOXD13P35453 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.64□□□□□ -1.51
HOXD13P35453 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXD13P35453 RNA5SP92-201ENST00000516437 110 ntBASIC5.64□□□□□ -1.51
HOXD13P35453 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXD13P35453 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXD13P35453 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXD13P35453 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXD13P35453 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXD13P35453 AC027176.2-201ENST00000559166 746 ntBASIC5.64□□□□□ -1.51
HOXD13P35453 CD24P2-201ENST00000565486 219 ntBASIC5.64□□□□□ -1.51
HOXD13P35453 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXD13P35453 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.64□□□□□ -1.51
HOXD13P35453 AC138965.3-201ENST00000623875 498 ntBASIC5.64□□□□□ -1.51
HOXD13P35453 AC119674.1-212ENST00000641155 993 ntBASIC5.64□□□□□ -1.51
HOXD13P35453 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXD13P35453 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
HOXD13P35453 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXD13P35453 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HOXD13P35453 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.64□□□□□ -1.51
HOXD13P35453 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXD13P35453 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HOXD13P35453 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.64□□□□□ -1.51
HOXD13P35453 AC073136.1-201ENST00000449426 2884 ntBASIC5.64□□□□□ -1.51
HOXD13P35453 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXD13P35453 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXD13P35453 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
HOXD13P35453 AC027228.2-201ENST00000567141 2154 ntBASIC5.63□□□□□ -1.51
HOXD13P35453 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXD13P35453 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXD13P35453 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.63□□□□□ -1.51
HOXD13P35453 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
HOXD13P35453 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HOXD13P35453 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXD13P35453 AL390316.1-201ENST00000406279 553 ntBASIC5.63□□□□□ -1.51
HOXD13P35453 AL121878.1-201ENST00000418638 859 ntBASIC5.63□□□□□ -1.51
HOXD13P35453 AL355433.1-201ENST00000422804 300 ntBASIC5.63□□□□□ -1.51
HOXD13P35453 SETP10-201ENST00000424368 814 ntBASIC5.63□□□□□ -1.51
HOXD13P35453 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HOXD13P35453 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.63□□□□□ -1.51
HOXD13P35453 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.63□□□□□ -1.51
HOXD13P35453 XKRY2-201ENST00000442362 1093 ntBASIC5.63□□□□□ -1.51
HOXD13P35453 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.63□□□□□ -1.51
HOXD13P35453 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXD13P35453 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.63□□□□□ -1.51
HOXD13P35453 AC116562.1-201ENST00000485355 781 ntBASIC5.63□□□□□ -1.51
HOXD13P35453 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.63□□□□□ -1.51
HOXD13P35453 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.63□□□□□ -1.51
HOXD13P35453 MYL12BP2-201ENST00000503948 512 ntBASIC5.63□□□□□ -1.51
HOXD13P35453 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.63□□□□□ -1.51
HOXD13P35453 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.63□□□□□ -1.51
HOXD13P35453 RNA5SP230-201ENST00000517039 122 ntBASIC5.63□□□□□ -1.51
HOXD13P35453 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.63□□□□□ -1.51
HOXD13P35453 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.63□□□□□ -1.51
HOXD13P35453 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
HOXD13P35453 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXD13P35453 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXD13P35453 AC090022.1-201ENST00000546569 311 ntBASIC5.63□□□□□ -1.51
HOXD13P35453 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXD13P35453 NOP56P3-201ENST00000549457 385 ntBASIC5.63□□□□□ -1.51
HOXD13P35453 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.63□□□□□ -1.51
HOXD13P35453 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.63□□□□□ -1.51
HOXD13P35453 AC018552.1-201ENST00000562099 811 ntBASIC5.63□□□□□ -1.51
HOXD13P35453 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXD13P35453 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.63□□□□□ -1.51
HOXD13P35453 MIR4660-201ENST00000583549 74 ntBASIC5.63□□□□□ -1.51
HOXD13P35453 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
HOXD13P35453 AL022394.1-201ENST00000606979 292 ntBASIC5.63□□□□□ -1.51
HOXD13P35453 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.63□□□□□ -1.51
HOXD13P35453 AL356094.1-201ENST00000624663 1212 ntBASIC5.63□□□□□ -1.51
HOXD13P35453 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXD13P35453 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.63□□□□□ -1.51
HOXD13P35453 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXD13P35453 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms