Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
CLIP1P30622 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC7.64□□□□□ -1.19
CLIP1P30622 AC016831.4-201ENST00000438302 307 ntBASIC7.64□□□□□ -1.19
CLIP1P30622 BTF3P6-201ENST00000448054 499 ntBASIC7.64□□□□□ -1.19
CLIP1P30622 CEACAMP6-201ENST00000452007 574 ntBASIC7.64□□□□□ -1.19
CLIP1P30622 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC7.64□□□□□ -1.19
CLIP1P30622 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC7.64□□□□□ -1.19
CLIP1P30622 AC026979.1-201ENST00000492525 396 ntBASIC7.64□□□□□ -1.19
CLIP1P30622 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC7.64□□□□□ -1.19
CLIP1P30622 ATP5J2P6-201ENST00000565203 266 ntBASIC7.64□□□□□ -1.19
CLIP1P30622 SNORA74C-1-201ENST00000580726 201 ntBASIC7.64□□□□□ -1.19
CLIP1P30622 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
CLIP1P30622 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CLIP1P30622 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CLIP1P30622 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC7.63□□□□□ -1.19
CLIP1P30622 AC073136.1-201ENST00000449426 2884 ntBASIC7.63□□□□□ -1.19
CLIP1P30622 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC7.63□□□□□ -1.19
CLIP1P30622 ATG4AP1-201ENST00000416893 538 ntBASIC7.63□□□□□ -1.19
CLIP1P30622 AC013429.2-201ENST00000418798 781 ntBASIC7.63□□□□□ -1.19
CLIP1P30622 AC092162.1-201ENST00000432828 434 ntBASIC7.63□□□□□ -1.19
CLIP1P30622 TXNP2-201ENST00000443918 295 ntBASIC7.63□□□□□ -1.19
CLIP1P30622 AC108463.1-201ENST00000450258 347 ntBASIC7.63□□□□□ -1.19
CLIP1P30622 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC7.63□□□□□ -1.19
CLIP1P30622 EEF1A1P25-201ENST00000495704 1267 ntBASIC7.63□□□□□ -1.19
CLIP1P30622 IGBP1P5-201ENST00000507524 1000 ntBASIC7.63□□□□□ -1.19
CLIP1P30622 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC7.63□□□□□ -1.19
CLIP1P30622 RNA5SP230-201ENST00000517039 122 ntBASIC7.63□□□□□ -1.19
CLIP1P30622 AC009643.1-201ENST00000532030 391 ntBASIC7.63□□□□□ -1.19
CLIP1P30622 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC7.63□□□□□ -1.19
CLIP1P30622 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC7.63□□□□□ -1.19
CLIP1P30622 RPL26P30-202ENST00000602923 645 ntBASIC7.63□□□□□ -1.19
CLIP1P30622 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC7.63□□□□□ -1.19
CLIP1P30622 KARSP3-201ENST00000571212 1504 ntBASIC7.63□□□□□ -1.19
CLIP1P30622 AC011755.1-201ENST00000623763 2049 ntBASIC7.63□□□□□ -1.19
CLIP1P30622 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CLIP1P30622 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC7.63□□□□□ -1.19
CLIP1P30622 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CLIP1P30622 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC7.62□□□□□ -1.19
CLIP1P30622 OR4K15-201ENST00000305051 1216 ntBASIC7.62□□□□□ -1.19
CLIP1P30622 RNA5-8SP7-201ENST00000363443 155 ntBASIC7.62□□□□□ -1.19
CLIP1P30622 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
CLIP1P30622 U3.35-201ENST00000408405 208 ntBASIC7.62□□□□□ -1.19
CLIP1P30622 AC104333.2-201ENST00000422630 192 ntBASIC7.62□□□□□ -1.19
CLIP1P30622 AC093166.2-201ENST00000455969 1017 ntBASIC7.62□□□□□ -1.19
CLIP1P30622 snoU13.1-201ENST00000459157 104 ntBASIC7.62□□□□□ -1.19
CLIP1P30622 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC7.62□□□□□ -1.19
CLIP1P30622 RPL36AP41-201ENST00000493820 306 ntBASIC7.62□□□□□ -1.19
CLIP1P30622 RNU1-6P-201ENST00000516290 144 ntBASIC7.62□□□□□ -1.19
CLIP1P30622 AC090286.3-201ENST00000573133 187 ntBASIC7.62□□□□□ -1.19
CLIP1P30622 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC7.62□□□□□ -1.19
CLIP1P30622 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CLIP1P30622 AC010480.1-201ENST00000624823 684 ntBASIC7.62□□□□□ -1.19
CLIP1P30622 AC006453.5-201ENST00000636451 619 ntBASIC7.62□□□□□ -1.19
CLIP1P30622 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
CLIP1P30622 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CLIP1P30622 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC7.62□□□□□ -1.19
CLIP1P30622 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CLIP1P30622 ZFRP1-201ENST00000457579 2970 ntBASIC7.62□□□□□ -1.19
CLIP1P30622 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CLIP1P30622 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CLIP1P30622 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CLIP1P30622 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CLIP1P30622 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CLIP1P30622 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CLIP1P30622 SCARNA15-201ENST00000607520 4325 ntBASIC7.61□□□□□ -1.19
CLIP1P30622 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CLIP1P30622 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CLIP1P30622 AL049693.1-201ENST00000402760 611 ntBASIC7.61□□□□□ -1.19
CLIP1P30622 RN7SKP106-201ENST00000410832 272 ntBASIC7.61□□□□□ -1.19
CLIP1P30622 RPL7P57-201ENST00000423238 740 ntBASIC7.61□□□□□ -1.19
CLIP1P30622 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC7.61□□□□□ -1.19
CLIP1P30622 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CLIP1P30622 RPL10P17-201ENST00000453852 316 ntBASIC7.61□□□□□ -1.19
CLIP1P30622 OR52A4P-201ENST00000472867 958 ntBASIC7.61□□□□□ -1.19
CLIP1P30622 ASB8-204ENST00000536071 568 ntTSL 4 BASIC7.61□□□□□ -1.19
CLIP1P30622 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC7.61□□□□□ -1.19
CLIP1P30622 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC7.61□□□□□ -1.19
CLIP1P30622 AC127024.5-201ENST00000580085 462 ntBASIC7.61□□□□□ -1.19
CLIP1P30622 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC7.61□□□□□ -1.19
CLIP1P30622 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CLIP1P30622 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC7.61□□□□□ -1.19
CLIP1P30622 AC002525.1-201ENST00000624392 1622 ntBASIC7.61□□□□□ -1.19
CLIP1P30622 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC7.61□□□□□ -1.19
CLIP1P30622 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CLIP1P30622 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CLIP1P30622 MIR129-1-201ENST00000384972 72 ntBASIC7.61□□□□□ -1.19
CLIP1P30622 ELOCP19-201ENST00000411919 318 ntBASIC7.61□□□□□ -1.19
CLIP1P30622 AC012512.1-201ENST00000446594 718 ntBASIC7.61□□□□□ -1.19
CLIP1P30622 CDV3-208ENST00000511392 554 ntTSL 5 BASIC7.61□□□□□ -1.19
CLIP1P30622 IGKV2D-10-201ENST00000520194 281 ntBASIC7.61□□□□□ -1.19
CLIP1P30622 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC7.61□□□□□ -1.19
CLIP1P30622 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC7.61□□□□□ -1.19
CLIP1P30622 MIR4715-201ENST00000584117 79 ntBASIC7.61□□□□□ -1.19
CLIP1P30622 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC7.61□□□□□ -1.19
CLIP1P30622 AC020915.5-201ENST00000596836 964 ntBASIC7.61□□□□□ -1.19
CLIP1P30622 AC100778.3-201ENST00000580060 1750 ntBASIC7.6□□□□□ -1.19
CLIP1P30622 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CLIP1P30622 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
CLIP1P30622 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CLIP1P30622 ACTR3BP5-201ENST00000448440 1479 ntBASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms