Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC7.16□□□□□ -1.26
LIG1P18858 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.16□□□□□ -1.26
LIG1P18858 GLYATL1P2-202ENST00000588046 902 ntBASIC7.16□□□□□ -1.26
LIG1P18858 NPIPB1P-202ENST00000588786 828 ntBASIC7.16□□□□□ -1.26
LIG1P18858 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC7.16□□□□□ -1.26
LIG1P18858 AL589863.1-201ENST00000595383 631 ntBASIC7.16□□□□□ -1.26
LIG1P18858 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC7.16□□□□□ -1.26
LIG1P18858 AC011500.1-201ENST00000601963 469 ntBASIC7.16□□□□□ -1.26
LIG1P18858 AC090181.2-201ENST00000602975 672 ntBASIC7.16□□□□□ -1.26
LIG1P18858 AC011891.2-201ENST00000604949 397 ntBASIC7.16□□□□□ -1.26
LIG1P18858 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.16□□□□□ -1.26
LIG1P18858 AL592494.3-201ENST00000609485 464 ntBASIC7.16□□□□□ -1.26
LIG1P18858 AC100793.4-201ENST00000613683 429 ntBASIC7.16□□□□□ -1.26
LIG1P18858 AC105227.2-201ENST00000615075 605 ntBASIC7.16□□□□□ -1.26
LIG1P18858 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
LIG1P18858 AL122023.1-201ENST00000622847 530 ntBASIC7.16□□□□□ -1.26
LIG1P18858 AC024595.1-201ENST00000623088 387 ntBASIC7.16□□□□□ -1.26
LIG1P18858 AC109454.4-201ENST00000623411 649 ntBASIC7.16□□□□□ -1.26
LIG1P18858 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LIG1P18858 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC7.16□□□□□ -1.26
LIG1P18858 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC7.16□□□□□ -1.26
LIG1P18858 AC007842.1-201ENST00000597336 2039 ntBASIC7.16□□□□□ -1.26
LIG1P18858 AC004520.1-201ENST00000608362 1413 ntBASIC7.16□□□□□ -1.26
LIG1P18858 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
LIG1P18858 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
LIG1P18858 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LIG1P18858 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC7.16□□□□□ -1.26
LIG1P18858 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC7.16□□□□□ -1.26
LIG1P18858 AC245100.2-201ENST00000454544 1679 ntBASIC7.16□□□□□ -1.26
LIG1P18858 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
LIG1P18858 AC087359.1-201ENST00000508335 1740 ntBASIC7.15□□□□□ -1.26
LIG1P18858 AL603750.1-201ENST00000624216 1717 ntBASIC7.15□□□□□ -1.26
LIG1P18858 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
LIG1P18858 ALB-214ENST00000509063 1911 ntTSL 5 BASIC7.15□□□□□ -1.26
LIG1P18858 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
LIG1P18858 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
LIG1P18858 AC092070.2-203ENST00000598377 3644 ntBASIC7.15□□□□□ -1.26
LIG1P18858 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC7.15□□□□□ -1.26
LIG1P18858 RPL11P4-201ENST00000332269 436 ntBASIC7.15□□□□□ -1.26
LIG1P18858 RN7SKP250-201ENST00000363924 321 ntBASIC7.15□□□□□ -1.26
LIG1P18858 TINAG-203ENST00000370869 782 ntTSL 3 BASIC7.15□□□□□ -1.26
LIG1P18858 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC7.15□□□□□ -1.26
LIG1P18858 DNAJC19P6-201ENST00000401853 280 ntBASIC7.15□□□□□ -1.26
LIG1P18858 RN7SKP151-201ENST00000410230 316 ntBASIC7.15□□□□□ -1.26
LIG1P18858 RNU4-74P-201ENST00000411280 161 ntBASIC7.15□□□□□ -1.26
LIG1P18858 TRBV24OR9-2-201ENST00000416632 435 ntBASIC7.15□□□□□ -1.26
LIG1P18858 AL139158.1-201ENST00000424719 340 ntBASIC7.15□□□□□ -1.26
LIG1P18858 AC092651.1-201ENST00000426110 312 ntBASIC7.15□□□□□ -1.26
LIG1P18858 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC7.15□□□□□ -1.26
LIG1P18858 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC7.15□□□□□ -1.26
LIG1P18858 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.15□□□□□ -1.26
LIG1P18858 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC7.15□□□□□ -1.26
LIG1P18858 AC097359.1-201ENST00000447946 463 ntBASIC7.15□□□□□ -1.26
LIG1P18858 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC7.15□□□□□ -1.26
LIG1P18858 VPS25P1-201ENST00000455691 508 ntBASIC7.15□□□□□ -1.26
LIG1P18858 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC7.15□□□□□ -1.26
LIG1P18858 RPL9P33-201ENST00000484311 566 ntBASIC7.15□□□□□ -1.26
LIG1P18858 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.15□□□□□ -1.26
LIG1P18858 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
LIG1P18858 AC112198.1-201ENST00000505369 1220 ntBASIC7.15□□□□□ -1.26
LIG1P18858 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC7.15□□□□□ -1.26
LIG1P18858 AC109458.1-201ENST00000508858 316 ntBASIC7.15□□□□□ -1.26
LIG1P18858 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC7.15□□□□□ -1.26
LIG1P18858 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC7.15□□□□□ -1.26
LIG1P18858 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC7.15□□□□□ -1.26
LIG1P18858 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.15□□□□□ -1.26
LIG1P18858 RPL3P13-201ENST00000550415 216 ntBASIC7.15□□□□□ -1.26
LIG1P18858 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC7.15□□□□□ -1.26
LIG1P18858 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC7.15□□□□□ -1.26
LIG1P18858 PDCD6IPP2-207ENST00000566321 1069 ntBASIC7.15□□□□□ -1.26
LIG1P18858 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC7.15□□□□□ -1.26
LIG1P18858 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC7.15□□□□□ -1.26
LIG1P18858 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC7.15□□□□□ -1.26
LIG1P18858 AL353621.2-201ENST00000605340 133 ntBASIC7.15□□□□□ -1.26
LIG1P18858 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.15□□□□□ -1.26
LIG1P18858 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC7.15□□□□□ -1.26
LIG1P18858 AC116651.1-201ENST00000609724 556 ntBASIC7.15□□□□□ -1.26
LIG1P18858 DLEU2_1.1-201ENST00000612089 120 ntBASIC7.15□□□□□ -1.26
LIG1P18858 DLEU2_1.2-201ENST00000614667 120 ntBASIC7.15□□□□□ -1.26
LIG1P18858 uc_338.29-201ENST00000615099 168 ntBASIC7.15□□□□□ -1.26
LIG1P18858 AL359314.1-201ENST00000616913 261 ntBASIC7.15□□□□□ -1.26
LIG1P18858 AC116667.2-201ENST00000641075 823 ntBASIC7.15□□□□□ -1.26
LIG1P18858 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC7.15□□□□□ -1.26
LIG1P18858 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
LIG1P18858 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC7.15□□□□□ -1.27
LIG1P18858 MTCO1P28-201ENST00000574177 1528 ntBASIC7.15□□□□□ -1.27
LIG1P18858 AC090181.3-201ENST00000624777 1514 ntBASIC7.15□□□□□ -1.27
LIG1P18858 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
LIG1P18858 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.27
LIG1P18858 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
LIG1P18858 HSPD1P7-201ENST00000447985 1686 ntBASIC7.15□□□□□ -1.27
LIG1P18858 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
LIG1P18858 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC7.15□□□□□ -1.27
LIG1P18858 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.15□□□□□ -1.27
LIG1P18858 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
LIG1P18858 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
LIG1P18858 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
LIG1P18858 Y_RNA.88-201ENST00000363029 99 ntBASIC7.14□□□□□ -1.27
LIG1P18858 RN7SKP171-201ENST00000364417 303 ntBASIC7.14□□□□□ -1.27
LIG1P18858 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms