Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AL450023.3-201ENST00000440592 271 ntBASIC3.76□□□□□ -1.81
CXCL1P09341 SNRPFP2-201ENST00000440710 251 ntBASIC3.76□□□□□ -1.81
CXCL1P09341 AL121877.1-201ENST00000453704 622 ntBASIC3.76□□□□□ -1.81
CXCL1P09341 AC019084.1-201ENST00000457337 432 ntBASIC3.76□□□□□ -1.81
CXCL1P09341 AC104849.1-201ENST00000462623 405 ntBASIC3.76□□□□□ -1.81
CXCL1P09341 RN7SL799P-201ENST00000475891 298 ntBASIC3.76□□□□□ -1.81
CXCL1P09341 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC3.76□□□□□ -1.81
CXCL1P09341 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC3.76□□□□□ -1.81
CXCL1P09341 AC025445.1-201ENST00000502728 300 ntBASIC3.76□□□□□ -1.81
CXCL1P09341 AC138866.2-201ENST00000508650 584 ntBASIC3.76□□□□□ -1.81
CXCL1P09341 AK6-204ENST00000512561 587 ntTSL 5 BASIC3.76□□□□□ -1.81
CXCL1P09341 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC3.76□□□□□ -1.81
CXCL1P09341 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC3.76□□□□□ -1.81
CXCL1P09341 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CXCL1P09341 AC018552.1-201ENST00000562099 811 ntBASIC3.76□□□□□ -1.81
CXCL1P09341 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CXCL1P09341 AC010547.6-201ENST00000571789 193 ntBASIC3.76□□□□□ -1.81
CXCL1P09341 AC130352.1-201ENST00000602979 661 ntBASIC3.76□□□□□ -1.81
CXCL1P09341 AC005377.1-201ENST00000605126 456 ntBASIC3.76□□□□□ -1.81
CXCL1P09341 AC000068.2-201ENST00000608816 460 ntBASIC3.76□□□□□ -1.81
CXCL1P09341 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CXCL1P09341 MIR6737-201ENST00000617385 70 ntBASIC3.76□□□□□ -1.81
CXCL1P09341 AC074276.2-201ENST00000619891 348 ntBASIC3.76□□□□□ -1.81
CXCL1P09341 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC3.76□□□□□ -1.81
CXCL1P09341 AC016542.2-201ENST00000624201 619 ntBASIC3.76□□□□□ -1.81
CXCL1P09341 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC3.76□□□□□ -1.81
CXCL1P09341 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CXCL1P09341 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CXCL1P09341 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
CXCL1P09341 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
CXCL1P09341 MAPK10-253ENST00000641010 4072 ntBASIC3.76□□□□□ -1.81
CXCL1P09341 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CXCL1P09341 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CXCL1P09341 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CXCL1P09341 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
CXCL1P09341 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CXCL1P09341 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CXCL1P09341 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CXCL1P09341 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
CXCL1P09341 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
CXCL1P09341 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CXCL1P09341 AC023490.2-201ENST00000359859 470 ntBASIC3.75□□□□□ -1.81
CXCL1P09341 MIR708-201ENST00000390708 88 ntBASIC3.75□□□□□ -1.81
CXCL1P09341 GAPDHP15-201ENST00000398586 975 ntBASIC3.75□□□□□ -1.81
CXCL1P09341 EEF1B2P8-201ENST00000414101 671 ntBASIC3.75□□□□□ -1.81
CXCL1P09341 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC3.75□□□□□ -1.81
CXCL1P09341 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.75□□□□□ -1.81
CXCL1P09341 AC066692.1-201ENST00000421721 457 ntBASIC3.75□□□□□ -1.81
CXCL1P09341 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CXCL1P09341 BX119904.1-201ENST00000432026 348 ntBASIC3.75□□□□□ -1.81
CXCL1P09341 EEF1B2P3-201ENST00000447718 678 ntBASIC3.75□□□□□ -1.81
CXCL1P09341 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC3.75□□□□□ -1.81
CXCL1P09341 AC073476.1-201ENST00000452854 407 ntBASIC3.75□□□□□ -1.81
CXCL1P09341 AC133473.1-201ENST00000455173 299 ntBASIC3.75□□□□□ -1.81
CXCL1P09341 AL133445.1-201ENST00000467051 452 ntBASIC3.75□□□□□ -1.81
CXCL1P09341 RN7SL51P-201ENST00000468230 285 ntBASIC3.75□□□□□ -1.81
CXCL1P09341 RPL23AP2-201ENST00000471227 466 ntBASIC3.75□□□□□ -1.81
CXCL1P09341 SIAH1P1-201ENST00000479411 923 ntBASIC3.75□□□□□ -1.81
CXCL1P09341 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CXCL1P09341 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.75□□□□□ -1.81
CXCL1P09341 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.75□□□□□ -1.81
CXCL1P09341 AC090281.1-201ENST00000523019 276 ntBASIC3.75□□□□□ -1.81
CXCL1P09341 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CXCL1P09341 CASP1P2-201ENST00000526830 1258 ntBASIC3.75□□□□□ -1.81
CXCL1P09341 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC3.75□□□□□ -1.81
CXCL1P09341 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC3.75□□□□□ -1.81
CXCL1P09341 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC3.75□□□□□ -1.81
CXCL1P09341 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC3.75□□□□□ -1.81
CXCL1P09341 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.75□□□□□ -1.81
CXCL1P09341 OR1AB1P-201ENST00000585564 761 ntBASIC3.75□□□□□ -1.81
CXCL1P09341 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.75□□□□□ -1.81
CXCL1P09341 AC011487.3-201ENST00000593607 453 ntBASIC3.75□□□□□ -1.81
CXCL1P09341 AC005520.3-201ENST00000602874 370 ntBASIC3.75□□□□□ -1.81
CXCL1P09341 AC079315.1-201ENST00000602952 623 ntBASIC3.75□□□□□ -1.81
CXCL1P09341 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.75□□□□□ -1.81
CXCL1P09341 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC3.75□□□□□ -1.81
CXCL1P09341 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.75□□□□□ -1.81
CXCL1P09341 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
CXCL1P09341 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CXCL1P09341 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
CXCL1P09341 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CXCL1P09341 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CXCL1P09341 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CXCL1P09341 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
CXCL1P09341 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CXCL1P09341 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CXCL1P09341 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.74□□□□□ -1.81
CXCL1P09341 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC3.74□□□□□ -1.81
CXCL1P09341 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.74□□□□□ -1.81
CXCL1P09341 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC3.74□□□□□ -1.81
CXCL1P09341 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.74□□□□□ -1.81
CXCL1P09341 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.74□□□□□ -1.81
CXCL1P09341 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.74□□□□□ -1.81
CXCL1P09341 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CXCL1P09341 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CXCL1P09341 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CXCL1P09341 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CXCL1P09341 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
CXCL1P09341 RNA5SP502-201ENST00000362694 119 ntBASIC3.74□□□□□ -1.81
CXCL1P09341 RNA5SP319-201ENST00000362768 119 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms