Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 NPM1P38-201ENST00000403835 865 ntBASIC4.78□□□□□ -1.64
TNFP01375 RNA5SP345-201ENST00000410646 108 ntBASIC4.78□□□□□ -1.64
TNFP01375 BX510359.2-201ENST00000417920 305 ntBASIC4.78□□□□□ -1.64
TNFP01375 OR2B7P-201ENST00000429302 934 ntBASIC4.78□□□□□ -1.64
TNFP01375 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.78□□□□□ -1.64
TNFP01375 AC000111.2-201ENST00000448200 210 ntBASIC4.78□□□□□ -1.64
TNFP01375 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TNFP01375 AL513533.1-201ENST00000453728 415 ntBASIC4.78□□□□□ -1.64
TNFP01375 RPS17P2-201ENST00000461663 408 ntBASIC4.78□□□□□ -1.64
TNFP01375 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.78□□□□□ -1.64
TNFP01375 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.78□□□□□ -1.64
TNFP01375 Y_RNA.719-201ENST00000517156 106 ntBASIC4.78□□□□□ -1.64
TNFP01375 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.78□□□□□ -1.64
TNFP01375 AC133555.2-201ENST00000550213 292 ntBASIC4.78□□□□□ -1.64
TNFP01375 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.78□□□□□ -1.64
TNFP01375 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.78□□□□□ -1.64
TNFP01375 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.78□□□□□ -1.64
TNFP01375 SNORA74C-1-201ENST00000580726 201 ntBASIC4.78□□□□□ -1.64
TNFP01375 AC011453.2-201ENST00000603737 729 ntBASIC4.78□□□□□ -1.64
TNFP01375 AC104687.2-201ENST00000604442 342 ntBASIC4.78□□□□□ -1.64
TNFP01375 AL133406.3-201ENST00000606817 541 ntBASIC4.78□□□□□ -1.64
TNFP01375 AC239803.2-201ENST00000610161 430 ntBASIC4.78□□□□□ -1.64
TNFP01375 uc_338.18-201ENST00000615451 175 ntBASIC4.78□□□□□ -1.64
TNFP01375 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.78□□□□□ -1.64
TNFP01375 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.78□□□□□ -1.64
TNFP01375 AC008758.3-201ENST00000507003 1829 ntBASIC4.78□□□□□ -1.64
TNFP01375 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TNFP01375 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
TNFP01375 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TNFP01375 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TNFP01375 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TNFP01375 ADAM24P-201ENST00000398655 2101 ntBASIC4.78□□□□□ -1.64
TNFP01375 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
TNFP01375 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TNFP01375 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TNFP01375 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.77□□□□□ -1.65
TNFP01375 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
TNFP01375 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.77□□□□□ -1.65
TNFP01375 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
TNFP01375 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TNFP01375 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TNFP01375 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TNFP01375 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TNFP01375 AC013442.1-201ENST00000397347 228 ntBASIC4.77□□□□□ -1.65
TNFP01375 AC079809.1-201ENST00000415468 276 ntBASIC4.77□□□□□ -1.65
TNFP01375 AC119751.6-201ENST00000416712 186 ntBASIC4.77□□□□□ -1.65
TNFP01375 AC005154.2-201ENST00000438110 379 ntBASIC4.77□□□□□ -1.65
TNFP01375 AC073052.1-201ENST00000440417 714 ntBASIC4.77□□□□□ -1.65
TNFP01375 CYCSP24-201ENST00000445119 316 ntBASIC4.77□□□□□ -1.65
TNFP01375 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.77□□□□□ -1.65
TNFP01375 RPL23AP72-201ENST00000492447 435 ntBASIC4.77□□□□□ -1.65
TNFP01375 OR2A3P-201ENST00000493774 953 ntBASIC4.77□□□□□ -1.65
TNFP01375 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
TNFP01375 RNA5SP392-201ENST00000516905 112 ntBASIC4.77□□□□□ -1.65
TNFP01375 BUD31P1-201ENST00000521828 359 ntBASIC4.77□□□□□ -1.65
TNFP01375 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.77□□□□□ -1.65
TNFP01375 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
TNFP01375 AC079075.1-201ENST00000559543 878 ntBASIC4.77□□□□□ -1.65
TNFP01375 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.77□□□□□ -1.65
TNFP01375 AC116553.2-201ENST00000564203 463 ntBASIC4.77□□□□□ -1.65
TNFP01375 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.77□□□□□ -1.65
TNFP01375 AC022726.1-201ENST00000587475 207 ntBASIC4.77□□□□□ -1.65
TNFP01375 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.77□□□□□ -1.65
TNFP01375 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.77□□□□□ -1.65
TNFP01375 MIR6853-201ENST00000619642 74 ntBASIC4.77□□□□□ -1.65
TNFP01375 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TNFP01375 AL078595.2-201ENST00000605309 1780 ntBASIC4.77□□□□□ -1.65
TNFP01375 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
TNFP01375 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TNFP01375 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.77□□□□□ -1.65
TNFP01375 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
TNFP01375 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TNFP01375 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
TNFP01375 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TNFP01375 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
TNFP01375 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TNFP01375 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
TNFP01375 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
TNFP01375 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TNFP01375 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.76□□□□□ -1.65
TNFP01375 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.76□□□□□ -1.65
TNFP01375 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.76□□□□□ -1.65
TNFP01375 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TNFP01375 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TNFP01375 RNU6-398P-201ENST00000384143 109 ntBASIC4.76□□□□□ -1.65
TNFP01375 U3.30-201ENST00000391308 210 ntBASIC4.76□□□□□ -1.65
TNFP01375 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.76□□□□□ -1.65
TNFP01375 AL136231.1-201ENST00000429407 730 ntBASIC4.76□□□□□ -1.65
TNFP01375 AC092162.1-201ENST00000432828 434 ntBASIC4.76□□□□□ -1.65
TNFP01375 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.76□□□□□ -1.65
TNFP01375 AC011753.3-201ENST00000443436 406 ntBASIC4.76□□□□□ -1.65
TNFP01375 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.76□□□□□ -1.65
TNFP01375 NDUFA12P1-201ENST00000455914 406 ntBASIC4.76□□□□□ -1.65
TNFP01375 AC010326.1-201ENST00000462726 602 ntBASIC4.76□□□□□ -1.65
TNFP01375 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TNFP01375 AC093890.1-201ENST00000502554 540 ntBASIC4.76□□□□□ -1.65
TNFP01375 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TNFP01375 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.76□□□□□ -1.65
TNFP01375 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.76□□□□□ -1.65
TNFP01375 AC092593.2-201ENST00000513866 913 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms